Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1791 ATGGTGCCATTTAGGTCTATTATTAAAGAAGTAGGGGAGAAAATGTTCTTTGCTACAAAGTTCTTATGCGTTTTACATCTTACCGACAAATATCTGATCAATAATATTCTGACTTCTGGTCCTAGCATGCTTCCTACAATCGATGTGACACCAAGCAGATTTCTTTCTGAAAGGATCTCACCTCGATTTGGTAAAGTTGCTCATGGAGATATTGTAGTCCTCCGTGCACCTCATACCCCTAGATTGTGCCTCACAAAGCGCTTGGTTGGATTAGAGGGTGATACCATCACATATGTTTCTGATCCCAATAACGATGATAAGCAGGAGACAGTCGTGGTTCCAAAGGGTCATGTTTGGGTAGAGGGTGATAACAAATTTCATAGCAGAGATTCTAGAAGTTTCGGTCCAGTTCCTTATGGCCTTATCGAGAGTAGGATATTCTGGAAGGTAGCTCCGCTTAAAGATTTTGGACCGTTCTGGAATAAATGA 489 0.4131 MVPFRSIIKEVGEKMFFATKFLCVLHLTDKYLINNILTSGPSMLPTIDVTPSRFLSERISPRFGKVAHGDIVVLRAPHTPRLCLTKRLVGLEGDTITYVSDPNNDDKQETVVVPKGHVWVEGDNKFHSRDSRSFGPVPYGLIESRIFWKVAPLKDFGPFWNK* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1791 162 Pfam Signal peptidase, peptidase S26 108 145 IPR019533 GO:0004252|GO:0006465
Mal5g1791 162 Pfam Signal peptidase, peptidase S26 22 99 IPR019533 GO:0004252|GO:0006465
Mal5g1791 162 SUPERFAMILY LexA/Signal peptidase 33 160 IPR036286 -
Mal5g1791 162 ProSitePatterns Signal peptidases I signature 3. 118 131 IPR019758 GO:0004252|GO:0016021
Mal5g1791 162 Gene3D Umud Fragment, subunit A 29 161 - -
Mal5g1791 162 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 2 161 - -
Mal5g1791 162 CDD S26_SPase_I 39 146 IPR019533 GO:0004252|GO:0006465
Mal5g1791 162 PRINTS Bacterial leader peptidase 1 (S26A) family signature 113 132 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mal5g1791 162 PRINTS Bacterial leader peptidase 1 (S26A) family signature 31 47 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mal5g1791 162 PRINTS Bacterial leader peptidase 1 (S26A) family signature 84 96 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mal5g1791 162 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 2 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1791 Mal-Chr5 36429173 36430065 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1791 43 159 MADS-box Gene Family AT1G29960 51.282 3.45e-40 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1791 K09647 - gmx:100526949 193.741