Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1775 ATGTTGCCGAGAATTTTTGTAAGTGATTTTGGTCATCAAATTTCCCGTTATGTGACATTAGAGGACCCCAAAGGAAATGAATTTGAAGTTTTGGTCGAAAAACACAATGGGTGTGTTTATTTGACTAAAGGATGGCAAGCACTTCGGGATTTTTATGGCATGCGATTGGGTGTTTGGGTTACTATGATTTGGCTTGGTCACAATAAGTTTTACATCACTATAAAGGATAGGTTTAACTGTACCATTCGTTACCCTACATTTGTCCCTGTCATGAAGTTTAAGGTTAACAAAATTGATGTAATTGATTTTGTGATTCATGGTGTGCCTACCCCGTACATGCATGATATGTTCAATTTTCAGTTTTCATCTGAAAAGTTCTTGACTTCATATGATGTTACAAATGGATACTTGATACTCCCATATGCTGGATTTTGTCAAATGACATTAACTAGGGATACTGCATGCTTTGGAGCAGTGTTGGCTACAATATGTGAAATAGAAGCAGATGTTGAATGGTATTTTCGATCATGCAGTCGTTGTGCATCATTGGTTACAATTGTTGAAGGCAAGTTATGTTGTAAGAAGTGTGCTGAATGCAAGGGTGTTGTTCCAAGGTTCAAACTACATGTAATCGTGATGGATCATACTGGATCGACAACTTTTGTGCTTTTTGATCATATTGTTACTCAATTTATTGGAAGATCCGTTCAAGATTTGCTTGACACAAATACATTGGATATAGACACTACATCTTTGGCTTTGGTTGATGATGATTGTGGCAACAAGTGGAATTGCATTGTTATTTTTGGATCAATTCCATTTGGACATGTCAAGATTGGAGGGGAGTGGAAACAGATGATTGCTGCACGCAGGATTAATGAAGGAGTGAACTTTGTCATTGGTGCTCCAATGCTTGGGTCGAATCAAACACTCTGCTTTACTGTCAGCCGTGCTTAG 957 0.3793 MLPRIFVSDFGHQISRYVTLEDPKGNEFEVLVEKHNGCVYLTKGWQALRDFYGMRLGVWVTMIWLGHNKFYITIKDRFNCTIRYPTFVPVMKFKVNKIDVIDFVIHGVPTPYMHDMFNFQFSSEKFLTSYDVTNGYLILPYAGFCQMTLTRDTACFGAVLATICEIEADVEWYFRSCSRCASLVTIVEGKLCCKKCAECKGVVPRFKLHVIVMDHTGSTTFVLFDHIVTQFIGRSVQDLLDTNTLDIDTTSLALVDDDCGNKWNCIVIFGSIPFGHVKIGGEWKQMIAARRINEGVNFVIGAPMLGSNQTLCFTVSRA* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1775 318 CDD RPA1_DBD_C 159 264 IPR013955 -
Mal5g1775 318 Gene3D - 146 268 IPR012340 -
Mal5g1775 318 Gene3D - 1 80 IPR015300 -
Mal5g1775 318 ProSiteProfiles B3 DNA-binding domain profile. 1 78 IPR003340 GO:0003677
Mal5g1775 318 SUPERFAMILY DNA-binding pseudobarrel domain 1 77 IPR015300 -
Mal5g1775 318 Pfam Replication factor-A C terminal domain 158 244 IPR013955 -
Mal5g1775 318 SUPERFAMILY Nucleic acid-binding proteins 152 267 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1775 Mal-Chr5 35989915 35994078 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1775 1 80 REM Transcription Factor Family AT3G53310 26.250 4.28e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1775 - - mtr:MTR_1g105765 160.999