Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1729 ATGGTGAATCAGAAAAGTTTATATGAAGAAGATGAAAGTGGAAGTGATGGCATTGGAAGTGATGGTAGTGAAAGTGATGGAAGTGAAAGTGATGGAAGTGCAGGTGATGAAAGTGGAGAAGATAAGAATTCTCATGATGATGATGATGATGATGATGATGGATTTGAAGATGATATGAATTCATATGATAATGGTAATCATGATACAATGGTAGGTGAAGCAATGGAATTTAGTAGTGTTGATGAAGCTTATGAGTTTTACTATAAGTATGGTAATTGTAAAGGTTTTGCAGTTAGGAAAAGTGATATTAGGACTAACAAGAAAAGTGGTCTAAAAGTGATGAGGCAGTTTGTATGCAACAAACATGGATTAAGAGACAAGAAGCATTTATCAAGGTCTAATAGGAAAAGAGATCACCGATGTCTCACCCGCACTAAATGTCCAACTAGGTTTCGTGTTCACTTCAAACCCATTAAAGATAGATATGTTCTGACAATTTTTGAAGAGGGTCATAACCATGAACTAACTCCATCAAGTTTAGTGCATTTACACCCAGTTTATGGTCATATTTCCGAGGCAGATAAAGCTCAGATTGATGACCTACATGTTGGGTTTACGAAGAAAGATCTGTACAATTATTTTGATAAAAAAATGTTTGATGTTACTAAAGATGGTGATATTTTTGCTGCTTTAAATTATCTTAAAGTGAAGTCTACCAGTGATCCAATGATGTATTGTAAATACTCTTCTACCGATGAAGGACGTGTGAAATGTCTATTTTGGGCAGATGACACAAGTAGATCCGATTTTTTTGTTTGTTTTGGTGATGTTCTAGCGTTTGACACAACTTACAACAAGAACAATTACAACTATCCACTGGTTATATTGTCTGGTTGCAACCACCACTCACAGACTGTTGTTTTTGGTGATGCATTGGTAATGGATGAAACAATGGAGACTTATATGTGGGTGTTGACTAATTTTTTAGACTGCATGGACAAGAAATTCCCACAAGCAGTTGTAACAAATGGTGATGGGGCTATGAGGGAGACTATAAAAAAGGTTATCCCTGGGGCGCGCCATCGTCTATGTGCTTGGCATTTGCACAAGAATGTTGTTGACAATATGAAGAATTCTACTTTTTTGGATGGTTTTAAAAAAGCAATGTTGTCAAATTTTACAGTGGCTGAATTTGAAGAGTTTTGGATGGATTTGGTGAAGGAGACTGGTCTTGAAAATAATGCTTGGGTTTCCAAAACATATGAAAACAAAACATTGTGGGCAACTGCATACTTACGTCACAACTTCTTTGAAGGGATAAGAATTACGTCTCAATGCGAGTCTTTGAATAAAATCATAAAGGCATATAGGCTACAGAATAATGAACTTGTAGCTGATTTTAAGTCCAAGTTTTCAGACCCTGTGTTGACAACTCATTTGCGTTTACTTGAAAGTGATGCTGCTAAGATTTACATGGCAGAGGTATTTGTAGAAGTTAAGGAGGAGATAATGAAATGTGTTGCATTAATTGTGAAGGAGAAAGTTGAAAAAGCTAGCCATAGGATGTTGACATTGACCCAATATTGTGCGGATGGTTCTTATGAAGCTGTATACGATGTTGATTCGTCAGAATTTCAATGTTCGTGCCATCTATTTGATACTCGCGGAATACCATGTTCACATATATTTTATGTGTTGAAGGAAGAAAATATTGATCACATTCCAACTGGCTTGATTATGAGGCGTTGGACTAAAAATGCCAAGAGCGGTTTTCTGAGTGTTGATTATCGTGGGGAAAGCGATTCTAAATTGATGGTTGCTGCTCGTTATGGTGCATACTGTTCACTTTTTACAAGTTTTTGCAAGTATGTATAA 1875 0.3632 MVNQKSLYEEDESGSDGIGSDGSESDGSESDGSAGDESGEDKNSHDDDDDDDDGFEDDMNSYDNGNHDTMVGEAMEFSSVDEAYEFYYKYGNCKGFAVRKSDIRTNKKSGLKVMRQFVCNKHGLRDKKHLSRSNRKRDHRCLTRTKCPTRFRVHFKPIKDRYVLTIFEEGHNHELTPSSLVHLHPVYGHISEADKAQIDDLHVGFTKKDLYNYFDKKMFDVTKDGDIFAALNYLKVKSTSDPMMYCKYSSTDEGRVKCLFWADDTSRSDFFVCFGDVLAFDTTYNKNNYNYPLVILSGCNHHSQTVVFGDALVMDETMETYMWVLTNFLDCMDKKFPQAVVTNGDGAMRETIKKVIPGARHRLCAWHLHKNVVDNMKNSTFLDGFKKAMLSNFTVAEFEEFWMDLVKETGLENNAWVSKTYENKTLWATAYLRHNFFEGIRITSQCESLNKIIKAYRLQNNELVADFKSKFSDPVLTTHLRLLESDAAKIYMAEVFVEVKEEIMKCVALIVKEKVEKASHRMLTLTQYCADGSYEAVYDVDSSEFQCSCHLFDTRGIPCSHIFYVLKEENIDHIPTGLIMRRWTKNAKSGFLSVDYRGESDSKLMVAARYGAYCSLFTSFCKYV* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1729 624 MobiDBLite consensus disorder prediction 1 67 - -
Mal5g1729 624 SMART 26again6 545 572 IPR006564 GO:0008270
Mal5g1729 624 PANTHER OS02G0262500 PROTEIN 74 602 - -
Mal5g1729 624 MobiDBLite consensus disorder prediction 42 59 - -
Mal5g1729 624 Pfam MULE transposase domain 277 371 IPR018289 -
Mal5g1729 624 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 74 602 IPR031052 GO:0006355
Mal5g1729 624 ProSiteProfiles Zinc finger SWIM-type profile. 534 570 IPR007527 GO:0008270
Mal5g1729 624 Pfam FAR1 DNA-binding domain 85 176 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1729 Mal-Chr5 34186417 34190774 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal5g1729 MULE 8.7e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1729 - - ccaj:109792835 646.351