Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1721 ATGTTCTCTGAAACAAAGCCAACTACTAAGGTGGAAATTCTAATCCAGCTTCTGAGAGAAGACAATACTTGTACTAAGTCGGTCATATTTACGCGTTATGATATTACCGTGCTCTATTTTCATACACGTTTGGGAATTGCAGGTTTCAAAACTTTCCCCTATACTACCAAAGCATTGCCTCACAATAGAAATAAGATCAAGGAATTTGAAAACATTGAAGAACCAGGAGTCTTGCTTATAGACTTTGAAACTTCGCGCAGACGTCGAGTTACTATAAATGCTGCATGCAGAGTCTTCCTATTGGATGCATGTAGGAAATCTATCGAGGAAGAGTTAGTGGCTCGTGTGAGACAACCATTGTCTGTTTTGAGATTGATATCTCAAAACACTATTGAAGATAAAATACTATCGTTGAAGGAGCCATTTTCTCAGACTGACACTTTTGATTTCGTTGACAAGGAGACCCTAAGATACATATTCCAACAAGATTGA 492 0.3801 MFSETKPTTKVEILIQLLREDNTCTKSVIFTRYDITVLYFHTRLGIAGFKTFPYTTKALPHNRNKIKEFENIEEPGVLLIDFETSRRRRVTINAACRVFLLDACRKSIEEELVARVRQPLSVLRLISQNTIEDKILSLKEPFSQTDTFDFVDKETLRYIFQQD* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1721 163 PANTHER TRANSCRIPTION TERMINATION FACTOR 2 4 142 - -
Mal5g1721 163 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 4 142 - -
Mal5g1721 163 Gene3D - 2 159 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1721 Mal-Chr5 33978927 33979418 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1721 14 140 RAD5 or RAD16-like Gene Family AT5G05130 30.882 5.13e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1721 - K15710 mtr:MTR_8g038520 224.172