Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1701 ATGGCTGTTCCTCTGCTAACCAAGAAGATTGTGAAGAAGCGTGTCAAGAGGTTCATCAGGCCTCAAAGTGACAGGAAAATATGTGTCAAGCCAAGCTGGCGTAGGCCAAAGGGTATTGATTCCCGAGTGAGGAGAAAGTTCAAAGGAGTTACATTGATGCCAAACATTGGATATGGCTCAGACAAGAAGACCCGCCACTATCTGCCAAATGGATTCAAGAAGTTTGTTGTGCACAATGTCAAGGATCTCGAACTTTTGATGATGCACAACAGGAAAAGAAAGGAGATTGTTGAACGTGCAGCTCAATTGGATGTTGTTGTCACCAACAAGCTGGCCAGGTTGCGCAGTCAAGAAGACGAGTGA 363 0.4545 MAVPLLTKKIVKKRVKRFIRPQSDRKICVKPSWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFVVHNVKDLELLMMHNRKRKEIVERAAQLDVVVTNKLARLRSQEDE* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1701 120 Pfam Ribosomal protein L32 16 109 IPR001515 GO:0003735|GO:0005840|GO:0006412
Mal5g1701 120 PANTHER 60S RIBOSOMAL PROTEIN L32-1 1 120 - -
Mal5g1701 120 SUPERFAMILY Ribosomal protein L32e 2 118 IPR036351 -
Mal5g1701 120 SMART Ribosomal_L32e_2 15 109 IPR001515 GO:0003735|GO:0005840|GO:0006412
Mal5g1701 120 CDD Ribosomal_L32_L32e 18 109 IPR001515 GO:0003735|GO:0005840|GO:0006412
Mal5g1701 120 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 1 120 IPR001515 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1701 Mal-Chr5 33557896 33559190 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1701 1 120 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 79.699 1.76e-73 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1701 K02912 - aof:109825329 214.927