Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1684 ATGATGCTTAGCGTTGTCGTGTTACTCCATAAACTTGCCGCTGACATTGTTAGGATAGTCACCATGGTTGATCAGGTTCAGCGCCCTAAACTCATTCAGAATGTTGCACGCCAGACCGGTCTTTCTATGTACCAAAGGAGGTCATTTGGAAATTACTCCAACCCTGCTTTTCAGTATCCAGTGATGCCAGCATGTAGCGCTACAACAGCTTCCCCTATCTTTGTTGCAGCTCCTGCTGAGAAAGGAAACTTTGTTGTCGACTTTCTCATGGGGGGAGTTTCTGCTGCTGTATCAAAAACTGCTGCTGCTCCCATCGAACGAATTAAGCTTTTGATCCAAAATCAGGATGAGATGATTAAAGCTGGTAGACTTTCTGAGCCCTACAAGGGAATCGGTGACTGTTTTAAGCGAACAACAGCCGAGGAAGGTGTTGTTGCCCTATGGAGAGGTAACACCGCAAATGTCATCCGTTATTTCCCCACTCAGGCTTTGAACTTTGCATTCAAGGACTACTTCAAGAGGCTTTTCAATTTCAAGAAGGACAAGGATGGTTACTGGAAATGGTTTGCTGGAAACTTGGCCTCAGGAGGTGCTGCTGGTGCTTCATCCCTTTTCTTCGTCTACTCCCTCGACTATGCTCGTACCCGTCTGGCAAATGACGCAAAGGCTGCAAAGAAAGGTGCAGGAGGAAGACAATTCAATGGTCTTATTGATGTCTACAAGAAGACACTGGCAACTGATGGTATTGCTGGCCTTTACCGTGGTTTCAACATCTCTTGTGTTGGAATCATTGTGTATCGCGGTCTCTACTTTGGAATGTATGATTCCTTGAAGCCAGTTCTCCTAACTGGATCTTTGCAGGATAGTTTCTTTGCTAGTTTTGGTCTTGGATGGCTCATCACCAATGGTGCAGGTCTAGCATCTTACCCAATTGACACAGTTAGAAGAAGAATGATGATGACATCTGGAGAAGCTGTGAAGTACAAGAGCTCCTTCGATGCATTCCAACAAATCCTCAAGAACGAGGGTGCTAAGTCCTTGTTTAAGGGAGCTGGTGCTAATATCCTCCGTGCTGTCGCTGGTGCTGGTGTGCTCGCTGGTTACGATAAGTTACAGGTCATAATGCTCGGCAAGAAGTACGGATCCGGTGGTGCTTAA 1158 0.4611 MMLSVVVLLHKLAADIVRIVTMVDQVQRPKLIQNVARQTGLSMYQRRSFGNYSNPAFQYPVMPACSATTASPIFVAAPAEKGNFVVDFLMGGVSAAVSKTAAAPIERIKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTTAEEGVVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKKGAGGRQFNGLIDVYKKTLATDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFQQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIMLGKKYGSGGA* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1684 385 PRINTS Mitochondrial carrier protein signature 100 114 IPR002067 GO:0055085
Mal5g1684 385 PRINTS Mitochondrial carrier protein signature 150 170 IPR002067 GO:0055085
Mal5g1684 385 PRINTS Mitochondrial carrier protein signature 87 100 IPR002067 GO:0055085
Mal5g1684 385 PRINTS Mitochondrial carrier protein signature 253 271 IPR002067 GO:0055085
Mal5g1684 385 PRINTS Mitochondrial carrier protein signature 297 319 IPR002067 GO:0055085
Mal5g1684 385 PRINTS Mitochondrial carrier protein signature 202 220 IPR002067 GO:0055085
Mal5g1684 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 82 175 IPR018108 -
Mal5g1684 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 187 280 IPR018108 -
Mal5g1684 385 SUPERFAMILY Mitochondrial carrier 82 370 IPR023395 -
Mal5g1684 385 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 41 385 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Mal5g1684 385 PRINTS Adenine nucleotide translocator signature 293 309 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Mal5g1684 385 PRINTS Adenine nucleotide translocator signature 161 173 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Mal5g1684 385 PRINTS Adenine nucleotide translocator signature 84 96 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Mal5g1684 385 PRINTS Adenine nucleotide translocator signature 187 200 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Mal5g1684 385 PRINTS Adenine nucleotide translocator signature 128 149 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Mal5g1684 385 Pfam Mitochondrial carrier protein 83 179 IPR018108 -
Mal5g1684 385 Pfam Mitochondrial carrier protein 289 375 IPR018108 -
Mal5g1684 385 Pfam Mitochondrial carrier protein 186 283 IPR018108 -
Mal5g1684 385 Gene3D Mitochondrial carrier domain 85 381 IPR023395 -
Mal5g1684 385 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 41 385 - -
Mal5g1684 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 288 374 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1684 Mal-Chr5 33176580 33178871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1684 22 385 Antiporters AT5G13490 78.961 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1684 K05863 - gmx:100793257 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g4717 2 102733563 102734968 Mal5g1684 5 33176580 33178871 ECH
Mal5g1684 5 33176580 33178871 Mal5g1684 5 33176580 33178871 ECH