Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1677 ATGGCTCACAAAATAACCAAAAAAGAAGAAACAGAATTCAAAGTTCCTGAAACAACAATAACACCAGCATGCATCAACCCAACACCAACACCTCCTCCAACCACAACCACAACCACAACAACAACGTTAACAGAATCTTCTAGATTCTTTGAAGACAATTCAAAAGCCAGATCCGCTACATCAACATGTTCTCAAAAGAGATCTCACCCCAGCAACGACGAATCAGAGCTTCAACCTCAAACGACGTCGTTTGAAGCCAAACGCGCGGTTAACCGTTGCTCCGGTTGTCGAAAACGAGTCGGACTCACCGGATTCCGTTGCCGATGCGGTGATCTGTTCTGCTCCGAGCATCGTTACTCCGATCGTCATGATTGTTCGTATGATTACAAAGCTGCTGGAAGAGAAACTATTGCTAGAGAAAATCCTGTTGTTAAAGCTGCGAAGATCGTTAAGCTCTGA 459 0.4466 MAHKITKKEETEFKVPETTITPACINPTPTPPPTTTTTTTTTLTESSRFFEDNSKARSATSTCSQKRSHPSNDESELQPQTTSFEAKRAVNRCSGCRKRVGLTGFRCRCGDLFCSEHRYSDRHDCSYDYKAAGRETIARENPVVKAAKIVKL* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1677 152 MobiDBLite consensus disorder prediction 1 84 - -
Mal5g1677 152 MobiDBLite consensus disorder prediction 1 15 - -
Mal5g1677 152 SMART AN1_Zf_4 93 130 IPR000058 GO:0008270
Mal5g1677 152 Gene3D - 58 148 IPR035896 -
Mal5g1677 152 Pfam AN1-like Zinc finger 93 130 IPR000058 GO:0008270
Mal5g1677 152 ProSiteProfiles Zinc finger AN1-type profile. 87 133 IPR000058 GO:0008270
Mal5g1677 152 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 151 - -
Mal5g1677 152 PANTHER AN1-LIKE ZINC FINGER PROTEIN 1 151 - -
Mal5g1677 152 SUPERFAMILY AN1-like Zinc finger 78 146 IPR035896 -
Mal5g1677 152 MobiDBLite consensus disorder prediction 35 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1677 Mal-Chr5 32969988 32970446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1677 91 152 C2H2 Transcription Factor Family AT3G52800 67.742 5.19e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1677 - - lja:Lj3g3v0478150.1 184.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g4736 2 103185261 103185749 Mal5g1677 5 32969988 32970446 ECH
Mal5g1677 5 32969988 32970446 Mal5g1677 5 32969988 32970446 ECH