Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1667 ATGGACAAGGGACCGCCTCCTACCCTCTTTGTCAATGATGGTTCATTTATGGAGAGGTTCAGGCAGCTCCAACAAGAGCAGGAGAGGGGGAAAAACGCCAAACCAGAGGACTCTAAACCAATTAAAGTTGTTTCAGGACCTCTGACTCCTAAAACCTCCATTAGTAAGGCTAATGATGCAAAGAAATCTTCCCAGGGTGGTTCCAGTGGCAAACTTGCTTTCAGCTTGAAACAAAAGTCAAAGCTAGTGCCGCCTCCTGTCAAGTTGGCTGATGACGATGAAGATGAAATAGATGCTGGGTATGTTTCAAATGATGCACCGACAAAACGGCAAAGATTGGGTCAGGATGATGGCATTGAGCAATCATCAAGACAACTTGATGTTGCACCTCCTCCCCCAAGTGATCCTACAGTGAAGAAAGTTGCTGACAAACTTGCAAGTTTTGTGGCTAAAAATGGAAGGCCATTTGAGGATGTTACACGGCAAAAAAACCCTGGGGATACACCTTTCAAGTTTTTGTTTGATGTTAAATGTTCTGACTATAAATATTATGAACATCGGCTTGCTCAAGAGGAGAAGTCCCTTTCACAGTCCAACGATCCACAGGCATATCAAAATGCAGGGACAAGCATTCCATCTTCCAGACCAACAAATGGTCCTCAGAGATCGTCCCAGCAGCATTCAACTTACCAAATCCCTGCCTCTGCTTTATATGATAGTGTTGACGTATCAAGGGGTTCTGGATCTGCAGGACAAACATTTTCAGTTGGAAGTTCTGATGAGTCCGGTGGATCATCAAATGCCAATTCTTTAGCGCTAATGGAGTTTTACATGAAGAAAGCCGCACAAGAAGAAAAGTTTAAACAACCTAGGCATTCAAAAGATGAGATGCCCCCTCCTCCTTCTCTTCAAGTTTCAACTTTTGATGCTTCAGCTTCAGGGAAAAAAGGCCATCACATGGGTGATTATATTCCTCAGGAAGAGCTGGAAAAGTTCTTGGCTAGCTGTAACGACGCAGCAGCTATGAAAGCTGCAAAGGAGGCTGCAGAGAGGGCCAAAATTCAGGCCGATAATGTGGGCCACAGGCTTTTATCAAAAATGGGTTGGAAAGAAGGTGAGGGTTTAGGTGGCTCTAGGAAGGGTATTGCAGATCCTATCATGGCAGGCAATGTTAAGAAAGATAACTTGGGAGTAGGTGCTGTCCAACCTGGGGAGGTGACTCCTGAGGATGACATCTATGAGCAGTACAAAAAGCGGATGATGCTTGGCTACCGTCACAGGCCGAATCCTCTGAACAATCCTCGCAAGGCTTACTACTGA 1320 0.4515 MDKGPPPTLFVNDGSFMERFRQLQQEQERGKNAKPEDSKPIKVVSGPLTPKTSISKANDAKKSSQGGSSGKLAFSLKQKSKLVPPPVKLADDDEDEIDAGYVSNDAPTKRQRLGQDDGIEQSSRQLDVAPPPPSDPTVKKVADKLASFVAKNGRPFEDVTRQKNPGDTPFKFLFDVKCSDYKYYEHRLAQEEKSLSQSNDPQAYQNAGTSIPSSRPTNGPQRSSQQHSTYQIPASALYDSVDVSRGSGSAGQTFSVGSSDESGGSSNANSLALMEFYMKKAAQEEKFKQPRHSKDEMPPPPSLQVSTFDASASGKKGHHMGDYIPQEELEKFLASCNDAAAMKAAKEAAERAKIQADNVGHRLLSKMGWKEGEGLGGSRKGIADPIMAGNVKKDNLGVGAVQPGEVTPEDDIYEQYKKRMMLGYRHRPNPLNNPRKAYY* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1667 439 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 3 439 IPR040169 -
Mal5g1667 439 PANTHER SURP AND G PATCH DOMAIN-CONTAINING 1 3 439 - -
Mal5g1667 439 MobiDBLite consensus disorder prediction 194 235 - -
Mal5g1667 439 Gene3D Surp module 114 198 IPR035967 GO:0003723|GO:0006396
Mal5g1667 439 MobiDBLite consensus disorder prediction 191 267 - -
Mal5g1667 439 Pfam G-patch domain 357 400 IPR000467 GO:0003676
Mal5g1667 439 MobiDBLite consensus disorder prediction 24 38 - -
Mal5g1667 439 MobiDBLite consensus disorder prediction 24 139 - -
Mal5g1667 439 SMART surpneu2 139 193 IPR000061 GO:0003723|GO:0006396
Mal5g1667 439 SUPERFAMILY Surp module (SWAP domain) 123 195 IPR035967 GO:0003723|GO:0006396
Mal5g1667 439 MobiDBLite consensus disorder prediction 284 318 - -
Mal5g1667 439 MobiDBLite consensus disorder prediction 48 75 - -
Mal5g1667 439 MobiDBLite consensus disorder prediction 245 267 - -
Mal5g1667 439 SMART G-patch_5 354 401 IPR000467 GO:0003676
Mal5g1667 439 Pfam Surp module 140 190 IPR000061 GO:0003723|GO:0006396
Mal5g1667 439 ProSiteProfiles SURP motif repeat profile. 141 184 IPR000061 GO:0003723|GO:0006396
Mal5g1667 439 ProSiteProfiles G-patch domain profile. 356 403 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1667 Mal-Chr5 32775355 32778832 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1667 342 439 C2H2 Transcription Factor Family AT5G26610 32.743 1.72e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1667 K13096 - gmx:100786213 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1667 5 32775355 32778832 Mal5g1667 5 32775355 32778832 ECH