Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1655 ATGGCTCAGTTTCAAGGTGATTTGGATCATGAGGGTATTGACTATATGTTCAAGATTGTTATGATTGGTGACTCTGGTGTTGGAAAATCTCAGCTTTTGAATCGGTTTGTTAGAAATGAGTTTCATATGAAATCTAAAGCTACAATTGGTGTTGAGTTTTTGACCAAGACTGTTCTTATGGATCATAAACTTGTTAAGGCTCAGATTTGGGATACTGCTGGTCAAGAAAGGTACCAGGCAATTACAACTGCATATTACAGAGGTGCAACTGGTGCATTGCTCACATATGACATAACCAAGCGTCATACCTTTAATCACATCGAAAAGTGGCTAGATGAACTACATAATCATGCAGATAAAAACATAGTTGTCATGCTTGTTGGCAACAAGTCTGACCTGAGTTCAATCCGAGAAGTGCCTATCGAGGAAGCCAAAGAGTTTGCCAAGCAGAAAGGTCTCTTCTTCCTCGAGACATCCGCACTTGACTCAAACAATGTAGAACCGGCTTTCCTTGGTCTTCTTTCACAAATATATGTAGCAATGAGTAAGAAACACATCACTGCAGATGGACATGAACGAAATTGGGATAAAGTGAACCTTGAATTTGAGGGGACAAAATTATTGGTCTCGTCTGAAGAACCAGAATGTCAAAAATCTAAAAGAAGATTCAGTTGTTGCAGTGTTTTTTAG 690 0.3899 MAQFQGDLDHEGIDYMFKIVMIGDSGVGKSQLLNRFVRNEFHMKSKATIGVEFLTKTVLMDHKLVKAQIWDTAGQERYQAITTAYYRGATGALLTYDITKRHTFNHIEKWLDELHNHADKNIVVMLVGNKSDLSSIREVPIEEAKEFAKQKGLFFLETSALDSNNVEPAFLGLLSQIYVAMSKKHITADGHERNWDKVNLEFEGTKLLVSSEEPECQKSKRRFSCCSVF* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1655 229 ProSiteProfiles small GTPase Rho family profile. 10 188 - -
Mal5g1655 229 ProSiteProfiles small GTPase Rab1 family profile. 12 226 - -
Mal5g1655 229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 183 IPR027417 -
Mal5g1655 229 SMART rab_sub_5 17 180 - -
Mal5g1655 229 SMART rho_sub_3 19 183 IPR001806 GO:0003924|GO:0005525
Mal5g1655 229 PRINTS Transforming protein P21 ras signature 40 56 - -
Mal5g1655 229 PRINTS Transforming protein P21 ras signature 17 38 - -
Mal5g1655 229 PRINTS Transforming protein P21 ras signature 155 177 - -
Mal5g1655 229 PRINTS Transforming protein P21 ras signature 120 133 - -
Mal5g1655 229 PRINTS Transforming protein P21 ras signature 58 80 - -
Mal5g1655 229 Gene3D - 10 217 IPR027417 -
Mal5g1655 229 PANTHER RAB GTPASE-LIKE PROTEIN G3A 1 227 - -
Mal5g1655 229 CDD Rab11_like 14 178 - -
Mal5g1655 229 PANTHER - 1 227 - -
Mal5g1655 229 SMART ras_sub_4 17 180 - -
Mal5g1655 229 ProSiteProfiles small GTPase Ras family profile. 11 229 IPR001806 GO:0003924|GO:0005525
Mal5g1655 229 TIGRFAM small_GTP: small GTP-binding protein domain 15 170 IPR005225 GO:0005525
Mal5g1655 229 SMART ran_sub_2 22 216 - -
Mal5g1655 229 Pfam Ras family 18 177 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1655 Mal-Chr5 32522561 32524400 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1655 K07904 - gmx:100789008 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1655 5 32522561 32524400 Mal5g1655 5 32522561 32524400 ECH