Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1649 ATGGAAGGAAGAGAAGGTATCAATCCTGGGGTAACAGTGATAGCGGCAGAAGCTCCATCGCCTTATCATGTAGCACCAAGGAGTGAAGTTCCAAACCAGGTTCATAACCCTGAAGTAGCAGCAGCTGCAGCTGCAGGAGGTGCTGCTGCTGCTGCTTCTACTGTCGGTGTTTCGCCGGTGAGCGTAGGTTTGGATGGAACAGTTAAGAAGAAAAGGGGTAGACCAAGGAAATATGGGCCAGATGGGTCTGTCAATATGCCATTGTCACCATCGCCTATCTCTTCTTCGGCTCCGCCTTCTTCTAAAGACTTCTCATCAGTGAAGCAAGTGAAACCACAGGGGATGGAATACAAAAGGGCAAAAAAGTTTGTGATGGATCATCTAGGTGAAATGAATGGACACTCTGATGGTACAAACTTTATGCCGCATTTCATCACTGTCAATGCCGGCGAGGACATAACAAATAAGGTAATATCATTTTCGCAACAAGGGCCGCGAGCTATATGTGTCTTATCAGCTAATGGAGCGATTTCAAATGTTACACTCCGTCACCCTGATTCATCTGGGGGTACTTTGACCTACGAGGGTCGTTTTGAGATACTTTCCTTGTCTGGATCATTCATGCCTACTGATAACCAAGGAACAAGAAGCAGGGCAGGTGGAATGAGTGTCTCGCTGGCAAGTCCTGATGGTCGCGTAGTAGGAGGTGGAGTTGCTGGTGTTCTTGTAGCTGCCACTCCTGTGCAGGTGGTGGTGGGAAGTTTTCTACCAAGCGGCCATCAAGATCAGAAAATAAAGAAGCCGAAGTCTGATTATGCAGCAGCCACATTTACTCAAGCCATTGTGGTGTCTCCAGCACCACCACCACCACCACCCCAAACCAATAATGCTGAAAAAGAGGATGTCATGGGTGGCGGTGGACATGTACCGCAAAATTCTGGAACCCTTAACTCAAATTTCACTTCTCCTCCGCCCACTGCCTTTCAAAGGGACAACTGGGTCAACATGCACTCTATGCCGGACACAAGAAAGTCAGCTACTGATATAAACATATCTCTGCCTGATAGTTAA 1071 0.4762 MEGREGINPGVTVIAAEAPSPYHVAPRSEVPNQVHNPEVAAAAAAGGAAAAASTVGVSPVSVGLDGTVKKKRGRPRKYGPDGSVNMPLSPSPISSSAPPSSKDFSSVKQVKPQGMEYKRAKKFVMDHLGEMNGHSDGTNFMPHFITVNAGEDITNKVISFSQQGPRAICVLSANGAISNVTLRHPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRAGGMSVSLASPDGRVVGGGVAGVLVAATPVQVVVGSFLPSGHQDQKIKKPKSDYAAATFTQAIVVSPAPPPPPPQTNNAEKEDVMGGGGHVPQNSGTLNSNFTSPPPTAFQRDNWVNMHSMPDTRKSATDINISLPDS* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1649 356 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 355 - -
Mal5g1649 356 SUPERFAMILY AF0104/ALDC/Ptd012-like 140 259 - -
Mal5g1649 356 MobiDBLite consensus disorder prediction 282 332 - -
Mal5g1649 356 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 355 IPR039605 GO:0003680
Mal5g1649 356 Pfam Plants and Prokaryotes Conserved (PCC) domain 142 255 IPR005175 -
Mal5g1649 356 MobiDBLite consensus disorder prediction 310 332 - -
Mal5g1649 356 MobiDBLite consensus disorder prediction 87 108 - -
Mal5g1649 356 MobiDBLite consensus disorder prediction 337 356 - -
Mal5g1649 356 ProSiteProfiles PPC domain profile profile. 137 278 IPR005175 -
Mal5g1649 356 Gene3D - 142 273 - -
Mal5g1649 356 CDD DUF296 142 230 IPR005175 -
Mal5g1649 356 MobiDBLite consensus disorder prediction 60 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1649 Mal-Chr5 32430568 32433790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1649 6 286 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 56.954 1.88e-95 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1649 - - gmx:100793726 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2568 3 98024836 98026939 Mal5g1649 5 32430568 32433790 PCT