Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1631 ATGGATCAAGTAGCACAAGGTCGTCCTCTTCCACCTCCATTTCTCACTAGAGATCTTCATCTTCATCCTCACCATCAATTTCACACCAACCACCAAACCAATGAAGAGGAACAACAGAGTGGCAATGGCAACTTAAGCCGGGGTCAAAAACGAGAACGAAACAACAACGACGACGGCAACAACACTCCCACCGGAGGAGAAGGAAAAGACGACGGCGGCAGTGGAAGCGCTGGCGGAGGAAGTGGTGGTGAGATGGGAAGAAGACCAAGAGGAAGACCAGCCGGTTCGAAAAACAAACCGAAGCCGCCTATTATCATCACGAGGGACAGCGCGAACGCACTCAGATCCCACGTGATGGAAGTCGCAAACGGATGTGACATAATGGAAAGTGTGACGGTCTTTGCGCGAAGGAGGCAGCGTGGTGTCTGCATCCTAAGCGGAAGTGGGACCGTCACAAACGTGACTCTCCGTCAACCAGCTTCACCTGGTGCGGTGGTCACACTTCACGGAAGATTCGAGATATTATCTTTATCTGGCTCATTCCTGCCGCCGCCTGCTCCACCAGCGGCGTCAGGATTGGCCATATATCTTGCTGGTGGACAAGGACAGGTCGTCGGTGGGAGCGTGGTGGGACCGTTGTTGGCTTCCGGTCCGGTTGTTATCATGGCAGCTTCCTTTGGAAATGCTGCTTATGAAAGATTGCCTTTAGAAGATGAAGAAACACCGGTGAATGTGCCAGGAAATGGAGGGTTAGGATCACCAGGAGCTATGGGAAATCAACAACAGCAGCAGCAACAACAGCAACAACAACAACTTGTGGCAGATCCTAACACTTCATCACTTTTCCATGGAGTTCCTCAAAATCTTCTCAATTCATGCCAATTGCCAGCTGAAGGTTATTGGGGTGGAAGTGCTCGTCCTCCATTTTAA 930 0.5097 MDQVAQGRPLPPPFLTRDLHLHPHHQFHTNHQTNEEEQQSGNGNLSRGQKRERNNNDDGNNTPTGGEGKDDGGSGSAGGGSGGEMGRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEVANGCDIMESVTVFARRRQRGVCILSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLAIYLAGGQGQVVGGSVVGPLLASGPVVIMAASFGNAAYERLPLEDEETPVNVPGNGGLGSPGAMGNQQQQQQQQQQQQLVADPNTSSLFHGVPQNLLNSCQLPAEGYWGGSARPPF* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1631 309 Pfam Plants and Prokaryotes Conserved (PCC) domain 115 227 IPR005175 -
Mal5g1631 309 ProSiteProfiles PPC domain profile profile. 111 249 IPR005175 -
Mal5g1631 309 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 5 309 IPR014476 GO:0003680
Mal5g1631 309 SUPERFAMILY AF0104/ALDC/Ptd012-like 111 246 - -
Mal5g1631 309 MobiDBLite consensus disorder prediction 254 285 - -
Mal5g1631 309 MobiDBLite consensus disorder prediction 239 285 - -
Mal5g1631 309 PIRSF ESCAROLA 16 309 IPR014476 GO:0003680
Mal5g1631 309 MobiDBLite consensus disorder prediction 1 105 - -
Mal5g1631 309 CDD DUF296 115 182 IPR005175 -
Mal5g1631 309 MobiDBLite consensus disorder prediction 33 49 - -
Mal5g1631 309 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 5 309 - -
Mal5g1631 309 MobiDBLite consensus disorder prediction 18 32 - -
Mal5g1631 309 Gene3D - 114 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1631 Mal-Chr5 31787958 31788887 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1631 1 309 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 64.308 1.35e-91 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1631 - - gmx:100816243 412.149