Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1620 ATGGATGAAAATGCGAAACGTGAATGGTCGCTCAAGGACTTCGAGATCGGAAAGCCACTCGGCAGAGGCAAATTCGGCAGAGTCTACGTTGCTAGAGAAGTCAAGAGCAAATATGTGATTGCATTGAAAGTTATCTTTAAGGAACAACTAGAAAAGTATAATATTCACCATCAGCTGAGGAGGGAAATGGAGATACAGATAAGCCTTAAACATCCAAACATCTTGCGTCTCTATGGTTGGTTTCATGATGACGAGCGTGTTTTCTTGATTCTTGAATATGCTCATAATGGTGAGCTGTACAAGGAGCTTCGCAAAAAAGGTCATTTCTCAGAGAAACAAGCTGCTACGTACATTTTAAGCCTCACAAAGGCATTGGCATATTGTCACGAGAAGCATGTTATTCACAGGGACATCAAGCCTGAAAATCTGTTGCTTGACCATGAGGGTCGTCTTAAGATTGCAGACTTTGGTTGGTCTGTACAATCTGTAAAAAAAAGAAAAACCATGTGTGGAACATTGGATTATTTAGCTCCTGAAATGGTAGAAAACAAAGGTCATGATTATGCTGTTGATAACTGGACCCTGGGTATTCTTTGTTATGAGTTCCTCTATGGTGCTCCTCCATTTGAGTCTGAAAGTCAAGAAGATACCTTCAAAAGGATAAGAGATGTTGATCTGAACTTCCCTCCTACCCCTCTTGTTTCTAAAAATGCGAAAAACCTGATAAGCCGGCTATTGGTAAAAGATTCTTCAAAAAGGCTCTCACTTCAGAAGATAACGGAGCATCCTTGGATTAAAGAGAATGCAAATCATGCGGGTGTCTGCGAGTAG 831 0.4079 MDENAKREWSLKDFEIGKPLGRGKFGRVYVAREVKSKYVIALKVIFKEQLEKYNIHHQLRREMEIQISLKHPNILRLYGWFHDDERVFLILEYAHNGELYKELRKKGHFSEKQAATYILSLTKALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSVKKRKTMCGTLDYLAPEMVENKGHDYAVDNWTLGILCYEFLYGAPPFESESQEDTFKRIRDVDLNFPPTPLVSKNAKNLISRLLVKDSSKRLSLQKITEHPWIKENANHAGVCE* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1620 276 ProSiteProfiles Protein kinase domain profile. 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1620 276 CDD STKc_Aurora 13 266 - -
Mal5g1620 276 Gene3D Transferase(Phosphotransferase) domain 1 98 273 - -
Mal5g1620 276 Pfam Protein kinase domain 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1620 276 ProSitePatterns Protein kinases ATP-binding region signature. 20 47 IPR017441 GO:0005524
Mal5g1620 276 SUPERFAMILY Protein kinase-like (PK-like) 8 268 IPR011009 -
Mal5g1620 276 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
Mal5g1620 276 SMART serkin_6 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1620 276 PIRSF ILK 3 264 - -
Mal5g1620 276 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 4 274 IPR030616 GO:0004672
Mal5g1620 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1620 Mal-Chr5 31689569 31693346 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1620 14 270 CBL-interacting serine-threonine protein kinases AT5G25110 38.023 2.78e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Mal5g1620 Pkinase 9.9e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1620 K08850 - gmx:100775802 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1620 5 31689569 31693346 Mal5g1620 5 31689569 31693346 ECH