Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1585 ATGGATTATTCGTGTGGAGGAAAGATTGGTGGAAGTGATATTCAAAGAAGTGGGCCTTGTGGTGCGTGCAAGTTTTTGAGAAGAAAGTGTGTAAAAGGTTGTATATTTGCACCATATTTTGATTCAGACCAAGGAACGGTTCATTTTGCAGCGGTTCATAAAGTGTTTGGTGCTAGTAATGCCTCTAAGCTACTCATGCGTATTCCAGTTCATAAACGTCTTGATGCTGTTGTTACTCTTTGCTATGAAGCTCTTGCTAGGGCTAGAGACCCCGTTTATGGATGTGTTGCTCACATCTTTGCACTTCAACAACAGTACCAAGACAACTATTTGCTAAATATTATGAACAGAATATATGAACAAAGATTTCACCTTGTAAGTAATGAACGATGA 393 0.3893 MDYSCGGKIGGSDIQRSGPCGACKFLRRKCVKGCIFAPYFDSDQGTVHFAAVHKVFGASNASKLLMRIPVHKRLDAVVTLCYEALARARDPVYGCVAHIFALQQQYQDNYLLNIMNRIYEQRFHLVSNER* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1585 130 ProSiteProfiles LOB domain profile. 18 119 IPR004883 -
Mal5g1585 130 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 7 106 - -
Mal5g1585 130 Pfam Lateral organ boundaries (LOB) domain 19 108 IPR004883 -
Mal5g1585 130 PANTHER LOB DOMAIN CONTAINING PROTEIN 7 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1585 Mal-Chr5 30975931 30976470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1585 9 108 AS2 family AT4G00210 75.000 3.83e-51 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal5g1585 LOB 1.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1585 - K21994 gmx:100791377 187.963