Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1576 ATGAGTGCCCTTCGAATCCTCTCCAGCACTACAATCAAGGCACCAAAAGTGGCTGGCTCAACCGATCAAAAAATTGATTTAACCCCATGGGATCTCCAATTCCTCCCATTTGGAGCCAACCAAAAGGGGTTGCTTTATCACCATCCCACAAAAGGAAACACATCAAACAAAATTGAACTCCTCAAATACTCTCTTACATATTTCCTTGAGTTTCTCCCCCCCTTTGCAGGTAGTCTCGAAATAACGGAACATGAAGATAACACTATCTCATGTTCCCTTGCATGCAACAATGCAGGTGTACTTTTTGTCCATGCCAAAGCAGAGAACACTTGTGTTGCTGACATCTTTGAGCCCACCTACCTTCCTCCGATTTTCCAGTCCTTCTTCCCACTTACTGGATTCAGAAACTATGAAGGTACGTCACAACCATTGCTTGCAGTCCAAGTGACAGAGTTGGTTGATGGCACCTTCATTGGTTGCACATGCAACCATGTTGTCATTGACGGCATGTCTGCTTTGCATTTCATTAATTTATTTACCAAAATCTTACGCGGCAACAACCAAGTAAAGACTGAACCTCCAAAACTCGAACGTTGGTTTCCCAGTGGAACTCAACGTCCCATACGATTTCCTTTCACGATAGACCCACCGGAGAAGATCCACTCTCATGAAGAAAAACTTAATCCACCTGAGAGAATTTTCCATTTCACAAAGGAGAAAATCATGAATCTCAAATTGAAAGCCAATGTAGAGGCTAATACAGATAAAATATCTTCCCTACAAGCGCTTTGCACTCACCTTTGGCGCTCTGTAATCCGTTCCAAACGACTTAGCGCACAAGAAGAAGTGAATTTTATATTATGTGTAAGTGTTAGATCAAGGGTTGTTCCACCATTGCCAGATGATTATTTTGGAAATGCTATGATAACTTGTGGGGTTACAATGAAAGCTGGGGAGCTACTGGAAGAAGACGGGCTTGGTAAAGGTGCTTTGGAGATGAACAAGATCATTGCTTTGCACTCTGATGAAAAGTTGAAGAATCACTATGAGTCTTGGTCGACAACACCAAACTTCATTAAGAATGGTAGCATGGCCAATAACAATTCCTTGATCATCAGTGGTTCTCCACTATTCAATGTTTACGATAATGATATTGGTTGGGGAAAGCCTATGGCAATTCGAAGTGGCGGTTCAAATAAAAGTAATGGAAAGATTAGTGTGTTTTCTGGTAAAGAAGAAGGTAGTATGGATTTTGAAGTGTGTCTTCCTTATGAGATTTTGGAGGCCATGGGAAATGATCCTGAGCTAATGAACTATGCATCCTGA 1326 0.4163 MSALRILSSTTIKAPKVAGSTDQKIDLTPWDLQFLPFGANQKGLLYHHPTKGNTSNKIELLKYSLTYFLEFLPPFAGSLEITEHEDNTISCSLACNNAGVLFVHAKAENTCVADIFEPTYLPPIFQSFFPLTGFRNYEGTSQPLLAVQVTELVDGTFIGCTCNHVVIDGMSALHFINLFTKILRGNNQVKTEPPKLERWFPSGTQRPIRFPFTIDPPEKIHSHEEKLNPPERIFHFTKEKIMNLKLKANVEANTDKISSLQALCTHLWRSVIRSKRLSAQEEVNFILCVSVRSRVVPPLPDDYFGNAMITCGVTMKAGELLEEDGLGKGALEMNKIIALHSDEKLKNHYESWSTTPNFIKNGSMANNNSLIISGSPLFNVYDNDIGWGKPMAIRSGGSNKSNGKISVFSGKEEGSMDFEVCLPYEILEAMGNDPELMNYAS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1576 441 Pfam Transferase family 6 437 - -
Mal5g1576 441 Gene3D - 216 432 IPR023213 -
Mal5g1576 441 Gene3D - 2 208 IPR023213 -
Mal5g1576 441 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 4 438 - -
Mal5g1576 441 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 4 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1576 Mal-Chr5 30488637 30489962 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1576 44 425 Monolignol Biosynthesis Gene Families AT5G48930 27.073 1.03e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1576 - - gmx:100500257 488.804