Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1570 ATGGCTGCTGGTTCAACAACAACAAATGATCAGGTTAGTATTCCTCCGCACATACACGATGATATTGCTTTATCTATTCTCTCCAAACTACCTCTTAAATCCCTTACTAGATTCACTTGTGCTCAAAAATCATGGTCTCTTCTATTTCAAAACCCTATTTTCATGAACATGTTTCGCGACAATTTCTTGCTATCCAAACATGACGAAGACGAAGACAACACACATCTCCTCCTGAAGGATCACCATACTCCGTACACATTTTCCGGTGAGAGTTTTGAGAATACAGTCAGATTAGATTGGCCACCGACTTTTAATGAGTATGATTCTTGTATTGAAATTTTGGGTTCTGCTAGTGTTAATGGCATTCTTTGTCTCTACGAAGACTGTGACGATGACTCGATAACTGTTTTGTGGAACCCTACTACCGGGGAATTTAAGACCATTCCTCCTAGCCTTCAACCATACGATAACATTGAGTTTAACCATCCTCCTGTTTCATTTGGTTACGACTATGTTAGAGATGACTATAAAATGATTCGGCATGTGGAATATCCCTTATACTTTGAAGGTAACTGGGTTTATTTGCCAAACAAGGGTGACCCTTTTTGGGAGACGGAAGTACATGAGTTAGATATGGATGACGATTTCTGGGCGGAAGAGGAGCTCATAGTTGGTATGTATGACCCTTTCTGGGAAATATATAGCCTTAGAAGTAATTCTTGGAAGAAACTCGATGGTGTCGATATGCCTGTTTCTTACCCAAACTTGATGGTGAACTTAAATGGATTTTGCCATTGGTTGAGCCAAGGAAATGATATGGTGTCATTTGACTTCAGTAAAGAGGTCTTCTTTGCGACGACCTTACCCTTTGACTTAGATGTACCACTTAAAAGCTCGAAGAGTGAATTGCTGGTGTTAAATGGATCTATTTCTCTCATCTCTAATTACAGTGAGGCAATTTATTTTCACATTTGGATTTTAGGTGAACTAGGTGTCAAGGAATCATGGACTAAATTATTCGTTGTCGGGCCCTTACCTTGTGTTATGTGTCCTCTCTCAACATGGAAGAGCCGTATATTCTTCAAGAAGCCTGACTTGGAGGTAGCTTGGTTTGATTTTATTACCCAAAGATTTGAGAAAATTGCAGTTAAAGGAGATTCAAATTGTTTGCTGATTGTAATTTATAAGGAAAATCTTATTCCTTTTCAATGA 1212 0.3878 MAAGSTTTNDQVSIPPHIHDDIALSILSKLPLKSLTRFTCAQKSWSLLFQNPIFMNMFRDNFLLSKHDEDEDNTHLLLKDHHTPYTFSGESFENTVRLDWPPTFNEYDSCIEILGSASVNGILCLYEDCDDDSITVLWNPTTGEFKTIPPSLQPYDNIEFNHPPVSFGYDYVRDDYKMIRHVEYPLYFEGNWVYLPNKGDPFWETEVHELDMDDDFWAEEELIVGMYDPFWEIYSLRSNSWKKLDGVDMPVSYPNLMVNLNGFCHWLSQGNDMVSFDFSKEVFFATTLPFDLDVPLKSSKSELLVLNGSISLISNYSEAIYFHIWILGELGVKESWTKLFVVGPLPCVMCPLSTWKSRIFFKKPDLEVAWFDFITQRFEKIAVKGDSNCLLIVIYKENLIPFQ* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1570 403 PANTHER OS09G0372900 PROTEIN-RELATED 17 389 - -
Mal5g1570 403 Pfam F-box associated 258 370 IPR006527 -
Mal5g1570 403 PANTHER CYCLIN-LIKE F-BOX, F-BOX PROTEIN INTERACTION DOMAIN 17 389 - -
Mal5g1570 403 SUPERFAMILY F-box domain 13 64 IPR036047 GO:0005515
Mal5g1570 403 TIGRFAM F_box_assoc_1: F-box protein interaction domain 232 343 IPR017451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1570 Mal-Chr5 30232116 30233327 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1570 227 348 Carbohydrate Esterase AT1G25141 25.373 2.73e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1570 - - mtr:MTR_8g032980 419.083