Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1563 ATGGATAATCATGATTCTGCACCTCCATATGGATATCCAAACCCTTATGCATACCCTCCATATCCATACCCTCCTCCAAATCCATCTCATGATCCATATGCTGCACCTCCACCACCAGTATCTGCTCCTTATCCATATGAATCATATCCACCAAATTCTTCACATTCCTTCAACTACTCATACTCTTATCCACCACCTCCTCAACCAAACCCTTTAGAGTTTCCTACTCATCAACCATCTCATGCTTATCCTTACCCTTACCAACAATGCCCTCCAGTTAGTGATGGTTCAAACCCTCATCATAGTTCTCCTTACCCTTACCAACAATACCCTCCAATTAGTGATGATTCTAACCCTCCTCATAATTCTGCTTACCCTTACCAATACCCTCCGGTTAATGATGGTTCAAACCCTCCTCAAAGTTCTGCTTACCAATACCCTCCTGTTAACGATGGTTCAAACCCTCATCATTTGAATGATCTTATGAGCAATGTTCAGATATCTGATAACAAGCCAAGTGCACCAGTAATGACATATTCCTATTCAGTTTCAAATGAAGGGAAAAGAGAGGAGTTTTATGGTCATTCTAGTCATAGCCAGAGTTTTTCAGGTTTTGAACATTCTTACTCTGGTGTGGGGAATTCACCCAAACTTTCATCTTATTCAGGTTCATTTAATGACTCGGTGCATAGCCAGAGTTCCCAGATTGTTCCAGCTCAGTATAAAGGGTCATTGAAATTTTTGCTCTTGCATGGTAATTTAGATATATGGATTCATGGTGCTAAGAATCTTCCAAATATGGATATGTTTCATAAGACTTTAGGGGATATGTTTGGTAAATTTCCTGGTAATGTGAGTAATAAGATTGAGGGAACAATGACTAGGAAGATTACTAGTGATCCATATGTGTCGATTTCTTTATCAAATGCTGTAGTTGGTAGGACTTTTGTGATTAGCAATAGTGAAAATCCTGTTTGGGAGCAACACTTTCATGTTCCTGTTGCACATCATGCTGCTGAAGTGCATTTTGTTGTTAAGGATAGTGATGTGGTAGGTTCACAGCTTATTGGTATTGTAGCGATTCCGGTTGAACAATTATACTCAGGTGAAAGGGTACAAGGGACTTATCCTATCCTTAATAGCAATGGAAAGCCATGTAAGCCAGGTGCTGTTTTGAGTGTTTCCATTCAGTTCATTCCAATAGAGAAACTGATCATTTATCATCAAGGAGTTGGAGCAGGACCGGACTATATTGGTGTGCCGGGAACATATTTTCCGTTGAGGAAAGGTGGAACTGTAACTCTATATCAAGATGCTCATGTTCCGGATAGATGCCTCCCGAATGTCATGCTTGATAATGGGATGCATTATGTTCATGGACAGTGTTGGATTGATATCTTTGATGCCATACGTCAAGCAAAGCGTTTGGTTTACATTACAGGGTGGTCAGTGTGGCACAACGTTAGTTTGGTAAGGGACGCTGCTGGACATGGTAAGACATCGGATTACTCGCTTGGTGAGCTTCTGAGGTCTAAGTCTCAGGAAGGAGTGAGAGTGCTTCTTCTTGTTTGGGATGACCCTACCTCAAGAAGCATTCTTGGTTATAAAACAGATGGTGTCATGGCAACGCATGATGAGGAAACTCGACGATTTTTCAAGCACTCTTCTGTGCAAGTGTTACTTTGTCCTCGAATGGCCGGAAAACGACATAGCTGGGCTAAGCAACAGGAGGTTGGAACAATATATACACATCATCAGAAGACTGTAATTGTAGATGCTGATGCTGGAAATAACAGAAGAAAAATTGTAGCATTTGTTGGTGGGCTTGATTTGTGTGACGGCCGATATGATACTCCACACCATCCCCTCTTTAGGACACTGCAGACAATCCATAAGGATGACTATCACAACCCTACTTTCACGGTTAATACTGGTGGCTGTCCACGAGAACCGTGGCACGACTTGCATTCTAAAATTGATGGTCCAGCAGCTTATGATGTTTTGAAAAACTTTGAGGAGCGGTGGTTAAGAGCTGCGAAACCTACAGGGATAAAAAAGTTGAAGAGTACATATGATGATGCATTGCTCAAGATAGAAAGAATTCCAGATATTCTCCGTGTATCTGATGCTCCTAGTGTACGTGAGGATAATCCTGTAGCTTGGCATGCTCAGATATTTCGTTCAATCGATTCAAACTCTGTCAAGGGATTTCCAAAGGAGCCAAGAGATGCATCAATGAAGAACCTAGTATGTGGGAAGAATGTACTGATTGACATGAGCATACATACAGCATATGTAAAGGCCATTCGTGCGGCACAGCATTACATTTATATAGAGAATCAGTATTTCATTGGTTCTTCATACAATTGGAGCCAAAATAAGGACATTGGTGCTAATAATTTAATTCCAATGGAAATTGCGCTAAAGATTGCTGAAAAAATAAAGGCAAATGAGAGGTTTGCAGTATACATAGTTATTCCAATGTGGCCAGAGGGTGTTCCAACAGGGGCTGCCACTCAAAGGATTCTATTTTGGCAGAATAAAACAATGCAAATGATGTACGAGACAATTTACAAGGCTTTGGTTGAAGTTGGGCTCGAGGCGGCATTCTCTCCACAAGACTATTTGAACTTTTTCTGTCTTGGAAATCGAGAAACCATAGATATGCATGAGGATATTTCTGTATCTGGAATTCCTCCCCCACCAAATACTCCACAAGCAAATAGTCGAAATAACCGACGGTTTATGATATATGTTCATTCGAAAGGCATGATAGTTGATGATGAATATGTGATAATTGGGTCAGCAAACATCAACCAGCGGTCTATGGAAGGAACAAGGGACACTGAGATTGCAATGGGAGCCTACCAACCTGAATATACATGGGCAAGAAAACAGACATATCCACGCGGACAGGTTCATGGATATAGGATGTCACTGTGGGCAGAACATACAGGCACAATCGAAGACTGTTTCTTACAACCAGAGAGCCTCGAATGTGTGAGAAGGGTTCGAACAATGTCCGAAATGAACTGGAAACAATTTGCATCAAATGATGTAACAGAGATGAGAGGGCATTTACTAAAGTACCCTGTAGAAGTTGATAGAAAGGGTAAGGTTAGATCACTTCCTGGCCATGAAGAGTTTCCTGATGTGGGAGGAAAGATAGTAGGATCATTTATTGCCATTCAAGAGAATCTAACCATTTGA 3210 0.4115 MDNHDSAPPYGYPNPYAYPPYPYPPPNPSHDPYAAPPPPVSAPYPYESYPPNSSHSFNYSYSYPPPPQPNPLEFPTHQPSHAYPYPYQQCPPVSDGSNPHHSSPYPYQQYPPISDDSNPPHNSAYPYQYPPVNDGSNPPQSSAYQYPPVNDGSNPHHLNDLMSNVQISDNKPSAPVMTYSYSVSNEGKREEFYGHSSHSQSFSGFEHSYSGVGNSPKLSSYSGSFNDSVHSQSSQIVPAQYKGSLKFLLLHGNLDIWIHGAKNLPNMDMFHKTLGDMFGKFPGNVSNKIEGTMTRKITSDPYVSISLSNAVVGRTFVISNSENPVWEQHFHVPVAHHAAEVHFVVKDSDVVGSQLIGIVAIPVEQLYSGERVQGTYPILNSNGKPCKPGAVLSVSIQFIPIEKLIIYHQGVGAGPDYIGVPGTYFPLRKGGTVTLYQDAHVPDRCLPNVMLDNGMHYVHGQCWIDIFDAIRQAKRLVYITGWSVWHNVSLVRDAAGHGKTSDYSLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRMAGKRHSWAKQQEVGTIYTHHQKTVIVDADAGNNRRKIVAFVGGLDLCDGRYDTPHHPLFRTLQTIHKDDYHNPTFTVNTGGCPREPWHDLHSKIDGPAAYDVLKNFEERWLRAAKPTGIKKLKSTYDDALLKIERIPDILRVSDAPSVREDNPVAWHAQIFRSIDSNSVKGFPKEPRDASMKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQNKDIGANNLIPMEIALKIAEKIKANERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYETIYKALVEVGLEAAFSPQDYLNFFCLGNRETIDMHEDISVSGIPPPPNTPQANSRNNRRFMIYVHSKGMIVDDEYVIIGSANINQRSMEGTRDTEIAMGAYQPEYTWARKQTYPRGQVHGYRMSLWAEHTGTIEDCFLQPESLECVRRVRTMSEMNWKQFASNDVTEMRGHLLKYPVEVDRKGKVRSLPGHEEFPDVGGKIVGSFIAIQENLTI* 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1563 1069 PANTHER PHOSPHOLIPASE D ALPHA 1 154 1069 - -
Mal5g1563 1069 MobiDBLite consensus disorder prediction 134 149 - -
Mal5g1563 1069 Gene3D Endonuclease Chain A 729 973 - -
Mal5g1563 1069 MobiDBLite consensus disorder prediction 21 153 - -
Mal5g1563 1069 Gene3D Endonuclease Chain A 455 697 - -
Mal5g1563 1069 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 580 615 IPR001736 GO:0003824
Mal5g1563 1069 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 915 942 IPR001736 GO:0003824
Mal5g1563 1069 SUPERFAMILY Phospholipase D/nuclease 423 679 - -
Mal5g1563 1069 SMART C2_3c 253 375 IPR000008 -
Mal5g1563 1069 ProSiteProfiles C2 domain profile. 231 376 IPR000008 -
Mal5g1563 1069 Pfam C2 domain 252 378 IPR000008 -
Mal5g1563 1069 MobiDBLite consensus disorder prediction 47 61 - -
Mal5g1563 1069 MobiDBLite consensus disorder prediction 21 46 - -
Mal5g1563 1069 CDD C2_plant_PLD 248 399 - -
Mal5g1563 1069 SMART pld_4 580 615 IPR001736 GO:0003824
Mal5g1563 1069 SMART pld_4 915 942 IPR001736 GO:0003824
Mal5g1563 1069 Gene3D C2 domain 248 386 IPR035892 -
Mal5g1563 1069 Pfam Phospholipase D Active site motif 916 942 IPR001736 GO:0003824
Mal5g1563 1069 Pfam Phospholipase D Active site motif 581 615 IPR001736 GO:0003824
Mal5g1563 1069 Pfam Phospholipase D C terminal 989 1059 IPR024632 -
Mal5g1563 1069 PANTHER PHOSPHOLIPASE D 154 1069 IPR015679 -
Mal5g1563 1069 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 250 401 IPR035892 -
Mal5g1563 1069 SUPERFAMILY Phospholipase D/nuclease 724 1001 - -
Mal5g1563 1069 MobiDBLite consensus disorder prediction 91 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1563 Mal-Chr5 30056547 30062791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1563 52 1069 Phospholipase D Gene Family (Wang group) AT2G42010 69.014 0.0 1437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1563 K01115 - gmx:100805294 1589.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1563 5 30056547 30062791 Mal5g1563 5 30056547 30062791 ECH