Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1562 ATGGATGATAAAAATTCTAGAAACATTGATCTCACTCTCGGAGAGCCCAAAGAGGAACCGGAAACAGAAGTGATGCCGGTGTCCATGCAAGTGAACAAAGCCATGGTTGAAGCCCAAGCTCAAACCCAAGCCCAGACCCAAACCCAACAATCAATTCAAAAGAGATCCTCCACAAAAGACCGTCACACCAAAGTCGAGGGTCGAGGCAGAAGGATCCGAATGCCTGCCACATGTGCGGCTCGGATCTTTCAGCTGACCCGAGAACTCGGACATAAGTCCGATGGGGAAACAATTCGATGGCTCCTCGAACACGCGGAGCCAGCAATCATTGCCGCCACCGGAACCGGCACAGTCCCCGCTATCGCCATGTCCGTCAACGGTACACTCAAAATCCCAACCACCTCCCCAAACGAAAACCCCGACCAAGAATCTAACCAACAATCTGATTCATCACCTGAGAAAAAGAAACGTAAACGACCATCGAACAGTGCTTACGTAGACATAAACGACAGCACCGTTTCAGTTTCAACCGGTTTAATAACAACCTCAAACATAAACACAAACACAAACCAAAACGTTATTCCACAACAAACCGCAATTCCGTTACCGCAAAACATGGTTCCTTTGTGGGCCATACCATCAAACGCTGTTGTTCCAGGTGGAAATGCTTTTTTCGTTGTTCCAACGAATCAACCTCAGTTTTTTACATTGGCTAGACCAATAACCGGTTTTGTTTCTTCCATGGTTACACCGGTTATTCAAGTTCAACAACCTTCATGTTCCTCCAACACGTGTTCGATATCGCCGGCGGTGAAGTCACCGGCTAGAGCCACCGTGATGGCACCGAGCACCGCCGCGGGAACCACCACGCAGATGCTAAGGGATTTTTCATTGGAGATTTATGATAGGCAAGAGCTTCAGTTATTATCACGATCTTCTTCGAAGCATTGA 951 0.4784 MDDKNSRNIDLTLGEPKEEPETEVMPVSMQVNKAMVEAQAQTQAQTQTQQSIQKRSSTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSPNENPDQESNQQSDSSPEKKKRKRPSNSAYVDINDSTVSVSTGLITTSNINTNTNQNVIPQQTAIPLPQNMVPLWAIPSNAVVPGGNAFFVVPTNQPQFFTLARPITGFVSSMVTPVIQVQQPSCSSNTCSISPAVKSPARATVMAPSTAAGTTTQMLRDFSLEIYDRQELQLLSRSSSKH* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1562 316 MobiDBLite consensus disorder prediction 1 24 - -
Mal5g1562 316 MobiDBLite consensus disorder prediction 129 164 - -
Mal5g1562 316 Pfam TCP family transcription factor 57 161 IPR017887 -
Mal5g1562 316 PANTHER TRANSCRIPTION FACTOR TCP9 5 314 - -
Mal5g1562 316 MobiDBLite consensus disorder prediction 129 147 - -
Mal5g1562 316 MobiDBLite consensus disorder prediction 148 163 - -
Mal5g1562 316 MobiDBLite consensus disorder prediction 36 70 - -
Mal5g1562 316 MobiDBLite consensus disorder prediction 36 54 - -
Mal5g1562 316 MobiDBLite consensus disorder prediction 55 70 - -
Mal5g1562 316 MobiDBLite consensus disorder prediction 1 22 - -
Mal5g1562 316 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 5 314 IPR005333 GO:0003700
Mal5g1562 316 ProSiteProfiles TCP domain profile. 58 112 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1562 Mal-Chr5 30014988 30015938 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1562 54 315 TCP Transcription Factor Family AT2G45680 53.667 9.92e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mal5g1562 TCP 3.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1562 - - cam:101488699 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1562 5 30014988 30015938 Mal5g1562 5 30014988 30015938 ECH