Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1527 ATGGAGTCTGACAAGTCCCAGTCAGCGAAACTGAGGAAGTACAATGGTCCAGTAGCTGGTGTCAAAGTGTTGGTTGTGGATGCTAACCCGGCATGCCGAACAGTTGTATCAAAAATGCTTCTTTCACTTGGATATGAGGTTATGACTGCTTCACTAGCTTCCGATGCATTATCCATTATCGGGGAGAAGAAGAATGAGCTTAACCTTGTGCTTGTGGAGGCTCAGTTGCCAGACATGGAAATATACGAGTTCATAGAGAAAATGGGAGAAAGCTTTAATCTTCCATCTGTCATTATGACTGCTTATGATGATGACACTCCTTCCATATCACGAGCACTTGGTTTAGGAGCTAAATTGTGTTACAGAAAGCCAGTTAAGATTTCTGAGCTACAGGATCTTTGGCAATTCTCAGTGTGGAACCGATGTGAAACAATAGTCACTGAAGCAGTACCTAACTTCGGTTGGCGTCTGTCAGATGTGATAAAGGCAACCAAGGATCTCGAATGCCGACCATTCATGAATACAGGAGAACTGTCTCGCCAAAATGCAAATGGTCTAGAAGGCCAACCATCCTTTAATGCCGGAGAAAAGACTCTCCAAAGTGCAAATGGTAAAGAACAAGAATCTCCTGATAAAGATACCTCGGGACTCCTGAAAAGGAAAAGGCCAACCTGGACTGATGATTTACATAGGAAGTTCTTGGAAGCTGTTGAATTAGCAGGAATCGATGCTTGTCCGAGGATAATATTCCATCTTATGGATGTGGAAGGACTTACACTAGAGAGCATCTCAAACTATTTACAGAAATATCGTCAATCTATGAAACTACGCGCTAGTGCAATGGAACAGCATGTGAATGGATATGTGTCTCTGACTAAAAGTAAAGGAAAACGCCCTTTATCCTTAGAAAAACAAGGTGTGACCAACAATCCACCTTTCGATCCGAAGGATCTCAGCAATTTTGTGCCTGTGCAAATTCTTGATTCTTCACTTCTTCCTTCCTTGGGAATCTCAAGTTGTCAGAAGTCGCCTTTCAGGCAAAATCAGCTGTCCCTGCCATTGAAACAGCAAGGTGTTGCGCACAGCACATCCAGCCTTGGACAACAATTGGATTCTTCAACACCACTGGCCTTTGACAAGTGCGAACCATCACGCGCAGTACTTCCTGTGCCTCCACTACCACCACCAGCTGAAAAATTAAACTATGATGAAATTTTTTACGCAAAAGGAAGTCAGATGTTTACTGATGAGGATTTGAAAATGTGGTTATCAACAATTCTAGATTTGAATGCTGTTGCTTGA 1302 0.427 MESDKSQSAKLRKYNGPVAGVKVLVVDANPACRTVVSKMLLSLGYEVMTASLASDALSIIGEKKNELNLVLVEAQLPDMEIYEFIEKMGESFNLPSVIMTAYDDDTPSISRALGLGAKLCYRKPVKISELQDLWQFSVWNRCETIVTEAVPNFGWRLSDVIKATKDLECRPFMNTGELSRQNANGLEGQPSFNAGEKTLQSANGKEQESPDKDTSGLLKRKRPTWTDDLHRKFLEAVELAGIDACPRIIFHLMDVEGLTLESISNYLQKYRQSMKLRASAMEQHVNGYVSLTKSKGKRPLSLEKQGVTNNPPFDPKDLSNFVPVQILDSSLLPSLGISSCQKSPFRQNQLSLPLKQQGVAHSTSSLGQQLDSSTPLAFDKCEPSRAVLPVPPLPPPAEKLNYDEIFYAKGSQMFTDEDLKMWLSTILDLNAVA* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1527 433 MobiDBLite consensus disorder prediction 178 205 - -
Mal5g1527 433 SMART REC_2 21 134 IPR001789 GO:0000160
Mal5g1527 433 MobiDBLite consensus disorder prediction 206 220 - -
Mal5g1527 433 MobiDBLite consensus disorder prediction 178 220 - -
Mal5g1527 433 ProSiteProfiles Response regulatory domain profile. 22 138 IPR001789 GO:0000160
Mal5g1527 433 Gene3D - 21 144 - -
Mal5g1527 433 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 221 272 IPR006447 GO:0003677
Mal5g1527 433 Gene3D - 218 276 - -
Mal5g1527 433 Pfam Response regulator receiver domain 23 132 IPR001789 GO:0000160
Mal5g1527 433 CDD REC_typeB_ARR-like 23 136 - -
Mal5g1527 433 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR8-RELATED 20 425 - -
Mal5g1527 433 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 425 IPR045279 GO:0009736
Mal5g1527 433 SUPERFAMILY CheY-like 20 135 IPR011006 -
Mal5g1527 433 SUPERFAMILY Homeodomain-like 218 275 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1527 Mal-Chr5 29428805 29431218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1527 20 366 Response Regulator Gene Family AT2G25180 27.473 1.36e-27 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal5g1527 Response_reg 8.7e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1527 - - mtr:MTR_8g032710 599.356