Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1519 ATGGTGGAAGATAGTATAGTTGCTGTTACAGTTGATACAAGTTCAACAGAAGAATGGTTGTTGAACTCACAAGAACTTGTTCCTATTGCTCTTACAAAAGCAAGAGAGGTAAAAGGGTTCCAAGGTAGGTGGAAAATGATCATTTCAAAATTGGAACAAGTTCCATCAAAGTTATCAGATTTATCAAGCCACCCTTGTTTTTCAAAGAATGCACTTTGCAAGGAACAATTACAGGCTGTGTCAAAGACACTAAGAGATGCTATGGAATTAGCTGAGTTATGTTTGAAGGAGAAATATGAAGGTAAACTAAGAATGCAGAGTGATCTTGATGCATTAATTGGTAAACTTGATTTGAATTTAAAGGATTGTAGCTTGTTAACAAAAACTGGTGTACTTGGTGAAGCTACTTTGCAATTCAATGTTTCTGGTTCTGTGGCGGAATCCGATATTGCAACACATAGCAATATAAAGGAGCTACTTGCGCGCCTTCAAATCGGTCATTTGGAATCAAAACACAAAGCTTTGGATAGACTTCATGATATTATGAGAGAAGATGAGAAGAATGTTTTGGCTGTTTTTTGTAGGAGCAATGTTGCTGCTTTGGTTCAGTTGCTTACAGCAACATCAACAAGGATTAGGGAGAAAACAGTTAGTATTATATGCTCTCTCGTTGAATCCGGTGGTAGCTGCGAAAACTGGTTAGTTTCTGAAGGTGTTTTGCCACCTCTTATAAGGCTTGTTGAATCAGGTAGTGCTGTCGGTAAAGAAAAGGCTCTCGTATCTCTTCAAAGATTGTCGATGTTGGAAGACACAACTCGCGCGATCGTTGGACATGGAGGAGTTCGTCCGTTGATCGAGGTTTGTCAGATTGGTGATTCTGTTTCACAATCTGCAGCTGCTTGTACTTTGAAGAATATTTCGGCTGTTCCGGAAGTGAGACAGGTTTTAGCTGAAGAAGGTGTTGTTAAGGTTATGATCAATCTTCTTAACAATGGAATGTTGTTAGGTACTAAAGAGTATGCTGCTGAGTGTTTGCAGAATCTCACTGCAAGCAATGAGAATCTGAGAAGGTCTGTTATATCAGAAGGCGGCGTTCGGAGCCTTTTGGCTTATCTTGATGGTCCACTTCCTCAAGAATCCGCTGTTGGAGCATTGAGGAATCTTGTTGGATCGGTTTCTGAGGAAACATTGGTTTCTCTTGGATTGCTTCCTTGTTTGGTTCATGTTTTGAAGTCAGGATCATTAGGCGCAAAGCAAGGCGCTGCGTCGGTCATATGCAGGATTTGTAGCTCTATTGAGATGAAGAAAATGTTAGGTGAAGTTGGCTGCATTCCTCTACTGATCAACATGCTTGAGGCTAAAGCAAACACTGCTAGAGAACTTGCAGCACAAGCAATTGCAAGCTTGATGATTTTGTCGCAAAATCGGAGAGAAGTTAAGAAGGATGATAAAAGCGTGCCGAATTTGGTTCAGTTGCTTGATCCAAGTCCACAGAACACTGCAAAAAAGTATGCAGTTTGTTGCCTTGGATCACTTTCTTCATGTAAGAAATGTAAGAGGTTGATGATTTCATATGGAGCAATAGGGTATTTGAAGAAGCTTATTGAGATGGAGATTCCAGGAGCTAAAAAGTTGCTTGAGAAATTGGAAAGAGGGAAACTCAGAAGCTTGTTTAGCAGAAAATAG 1686 0.4015 MVEDSIVAVTVDTSSTEEWLLNSQELVPIALTKAREVKGFQGRWKMIISKLEQVPSKLSDLSSHPCFSKNALCKEQLQAVSKTLRDAMELAELCLKEKYEGKLRMQSDLDALIGKLDLNLKDCSLLTKTGVLGEATLQFNVSGSVAESDIATHSNIKELLARLQIGHLESKHKALDRLHDIMREDEKNVLAVFCRSNVAALVQLLTATSTRIREKTVSIICSLVESGGSCENWLVSEGVLPPLIRLVESGSAVGKEKALVSLQRLSMLEDTTRAIVGHGGVRPLIEVCQIGDSVSQSAAACTLKNISAVPEVRQVLAEEGVVKVMINLLNNGMLLGTKEYAAECLQNLTASNENLRRSVISEGGVRSLLAYLDGPLPQESAVGALRNLVGSVSEETLVSLGLLPCLVHVLKSGSLGAKQGAASVICRICSSIEMKKMLGEVGCIPLLINMLEAKANTARELAAQAIASLMILSQNRREVKKDDKSVPNLVQLLDPSPQNTAKKYAVCCLGSLSSCKKCKRLMISYGAIGYLKKLIEMEIPGAKKLLEKLERGKLRSLFSRK* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1519 561 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 320 364 IPR000225 GO:0005515
Mal5g1519 561 SMART arm_5 185 225 IPR000225 GO:0005515
Mal5g1519 561 SMART arm_5 431 471 IPR000225 GO:0005515
Mal5g1519 561 SMART arm_5 268 308 IPR000225 GO:0005515
Mal5g1519 561 SMART arm_5 351 390 IPR000225 GO:0005515
Mal5g1519 561 SMART arm_5 391 430 IPR000225 GO:0005515
Mal5g1519 561 SMART arm_5 309 350 IPR000225 GO:0005515
Mal5g1519 561 SMART arm_5 472 514 IPR000225 GO:0005515
Mal5g1519 561 SUPERFAMILY ARM repeat 155 540 IPR016024 -
Mal5g1519 561 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 561 - -
Mal5g1519 561 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 561 - -
Mal5g1519 561 Gene3D - 335 545 IPR011989 -
Mal5g1519 561 Gene3D - 146 334 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1519 Mal-Chr5 29293631 29295316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1519 206 480 U-box Gene Family AT3G54790 28.571 3.35e-18 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1519 - - gmx:100809488 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1519 5 29293631 29295316 Mal5g1519 5 29293631 29295316 ECH