Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1518 ATGGAGGATCATGGAAACGCAATGCAAGAGGTTATGAGAGGGTATGAGTTTGCTGAACAACTTCGACAACTACTGCTCAAGAATAACAATAATAATAATAATAATTTGAGCGCAACAACCTCAACATTTGTTCAACATCTTGTAAACAACATCATCAATTCCTTTAACAATGTTCTCTTCCTTTTGAATAAACATATCCCAGCTGACCAAATACCAAAGGACTTTTCCTCCATTGATCAAGTAGTTAGATCTCTTGACTTCAAAGAAAGTTGCAAGAGTACTTCTGCAGCCAGAGGATGTAACAGAAAAAGAAACACTACACAACAAACATGGGATAAGGTGACCGAAACTCCAGATGATGATGATGGCCACCAATGGCGAAAGTATGGCAAGAAAAAGATCAACAATTCTCCATACTTAAGGAACTACTATAGGTGTACTCACAAGTTTGATCAGAGATGCCTAACAACCAAACATGTGCATAGAATTCAACACAAACCTCCCTTGTATAAGACCACCTATTATGGTCATCACACATGTGGAAACTTGCCCAACCCTCACATCATACTTGATCCTAATGACACTTCTTCCTTATTGCTTAGCTTTAACAACACATTCCCAACTCCAACAAAACAAGAATGTCCATTTTTATCATCGTCATCATTATCACTTTCTTCATCACCTAATTCAGCGGAGTATAACGAGGAAGTTCCTTCATATTCGTTAGATGATAAAAACCTTCCCTCCCCTGATCCCACTTTAGATAATTTTTCCCTTAGTACTCAATCATCAACACTTGAATCTGGTCAAAAGGACATGATGTATGGTTTCTTGTATGATCATGTTGAGTTTGATGATGATTTCTTGCAATCTTTTGGTGGGTTTTGA 888 0.375 MEDHGNAMQEVMRGYEFAEQLRQLLLKNNNNNNNNLSATTSTFVQHLVNNIINSFNNVLFLLNKHIPADQIPKDFSSIDQVVRSLDFKESCKSTSAARGCNRKRNTTQQTWDKVTETPDDDDGHQWRKYGKKKINNSPYLRNYYRCTHKFDQRCLTTKHVHRIQHKPPLYKTTYYGHHTCGNLPNPHIILDPNDTSSLLLSFNNTFPTPTKQECPFLSSSSLSLSSSPNSAEYNEEVPSYSLDDKNLPSPDPTLDNFSLSTQSSTLESGQKDMMYGFLYDHVEFDDDFLQSFGGF* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1518 295 SUPERFAMILY WRKY DNA-binding domain 116 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal5g1518 295 ProSiteProfiles WRKY domain profile. 115 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g1518 295 Pfam WRKY DNA -binding domain 121 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g1518 295 SMART WRKY_cls 120 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g1518 295 Gene3D WRKY domain 101 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal5g1518 295 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 287 - -
Mal5g1518 295 MobiDBLite consensus disorder prediction 102 122 - -
Mal5g1518 295 MobiDBLite consensus disorder prediction 227 261 - -
Mal5g1518 295 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 287 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1518 Mal-Chr5 29201965 29262117 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1518 7 180 WRKY Transcription Factor Family AT1G66560 35.057 2.27e-24 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal5g1518 WRKY 1e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1518 - - mtr:MTR_8g032510 420.239