Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1516 ATGTTCCTCTTGAACAAAGACAAATATGTCCCAACTAACCAGATACAAAAGGACCTTTCTTCCATTAATCCAGTAATTAGATCTATCGACTTCAAAGAAAGTTGCAATGGTTCTACTTCTACTACGATGGGAGGATGTTACAAAAAAAGAAAAACTACACAAGCATTGGAGAAAGTGACAAAAACTCCAACAGATGATGGGCATCAATGGAGAAAGTATGGACAGAAAAAGATCTGCAATTCTCAATACTTTAGGACCTACTACAGGTGTACTCACAAGTATGATCAAAGATGCCAAACAACTAAACAAGTGCATAGAATTCAAGAAAATCCTCCCTTGTATAAGACCACCTATTATGGTCATCACACTTGTGGAAACTTGCCCAACCCTAAAATCATACTTGATCCTAATGACACTTCTTCCTTATTGCTTAGCTTTAACAACACATTCCCAACTCCAACAAAACATGAATGCCCATTTTTATCATCGTCGTCATCATCATCACCACCACCATCATCATCACATTCGGTGGAGTATAAGGATGAAGTTCCCTCATCTTCCTTAGATATTGGTAACCCGCTTTCCACTAACCCCACTTTAGATACTTATATTTCTACACTTGAATCTGATCACACGGATTGGATGTATGGTTTCTTGTATGATTCTGTTGAGTATGATGGTGATTTCTTTCACCCTTTTCATTAG 705 0.3759 MFLLNKDKYVPTNQIQKDLSSINPVIRSIDFKESCNGSTSTTMGGCYKKRKTTQALEKVTKTPTDDGHQWRKYGQKKICNSQYFRTYYRCTHKYDQRCQTTKQVHRIQENPPLYKTTYYGHHTCGNLPNPKIILDPNDTSSLLLSFNNTFPTPTKHECPFLSSSSSSSPPPSSSHSVEYKDEVPSSSLDIGNPLSTNPTLDTYISTLESDHTDWMYGFLYDSVEYDGDFFHPFH* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1516 234 Gene3D WRKY domain 44 128 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal5g1516 234 ProSiteProfiles WRKY domain profile. 65 122 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g1516 234 MobiDBLite consensus disorder prediction 160 181 - -
Mal5g1516 234 SUPERFAMILY WRKY DNA-binding domain 59 125 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal5g1516 234 Pfam WRKY DNA -binding domain 65 124 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g1516 234 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 228 - -
Mal5g1516 234 SMART WRKY_cls 64 126 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal5g1516 234 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 228 IPR044810 GO:0003700
Mal5g1516 234 MobiDBLite consensus disorder prediction 160 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1516 Mal-Chr5 29092786 29096235 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1516 45 175 WRKY Transcription Factor Family AT3G56400 37.121 3.04e-23 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal5g1516 WRKY 2.4e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1516 - - mtr:MTR_8g032510 299.671