Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1487 ATGAATATGATGAGAAGACTCAAGAGCATTGCTTCTGGGAGAACTTCTATTTCTTCAGATCCTGGAGGGGATTCGAATTCGAAAAGAGTTAAGCTTGATCAAGAAACTGAAAAGGTTTATGAAGGAACAAATATGTTAGACAGAAATGATCAGGAGCAACGTGTGGATGCATCGAAAGAAGCAACAGTTGGAACATCCAATGTAGTATCTGCAGTAACTAAAACTGAGAAGAAGTCAGGTTTTGATGAACTTCCAAAAGAACTACACGAAATGAAAATTAGAGATGAGAAAAGCAAAAACAACAACAACAACAACAACGAAAAGGATATAGAAGCAACTACAGTGAGTGGCAATGGAACAGAAACAGGTCAAATTATTACAACTACTATCGGTGGTCGAGATGGACAACCAAAGCAGACAATCTCATACATGGCTGAACGTGTTGTCGGGACTGGTTCTTTTGGCGTTGTTTTCCAGGCTAAGTGCCTTGAAACTAGTGAAGCAGTTGCCATAAAAAAGGTGCTTCAAGACAAGAGATATAAGAATAGGGAACTCCAGGTTATGCGCATGGTTGACCATCCGAACGTTGTTAAGTTGAAGCACTGTTTCTATTCAACAACTGAGAAAGATGAATTATACCTTAACCTGGTTTTGGAGTATGTACCTGAAACTGTTTACAAAGTTTCTAAGAACTATATTCGGATGCACCAACATATGCCTATCATTCACGTGCAACTGTATACATACCAGATTTTACGTGGATTAAATTATTTACATGAAGTGATCGGTGTCTGTCATCGAGACATCAAACCCCAGAACCTTTTGGTCAATCCACAAACACATCAGTTAAAGATATGTGATTTCGGGAGTGCAAAGATGTTGGTGCCTGGTGAACCCAACATATCATACATATGCTCTAGATATTATAGAGCTCCAGAACTTATTTTTGGTGCAACTGAATACACAACTGCTATTGATATGTGGTCTGTTGGTTGTGTTTTGGCTGAGCTCCTTCTAGGACAGGCAATGTTTCCTGGAGAGAGTGGGGTTGATCAGCTAGTGGAGATCATTAAGGTCTTGGGAACACCAACAAGAGAAGAAATAAGGTGCATGAATCCAAACTACAATGAATTTAAGTTCCCGCAGATTAAAGCACATCCATGGCACAAGCTTTTTAACAAGAGAATGCCATCTGAAGCAGTGGATCTAGTTTCAAGGCTGCTTCAGTATTCACCACATCTACGTTGCACTGCTTTGGCTGCATGTGCACATCCATTCTTCAACGATCTGCGAGACCCGAATGCAAGCTTGCCAAATGGACAACCACTACCTCCTTTGTTCAACTTCACACCTCAAGAACTGGTAAATGCGCCTGAAGATTTGCGTCAACGTCTCATTCCTGAGCATGCAAGGAGTTAA 1419 0.4066 MNMMRRLKSIASGRTSISSDPGGDSNSKRVKLDQETEKVYEGTNMLDRNDQEQRVDASKEATVGTSNVVSAVTKTEKKSGFDELPKELHEMKIRDEKSKNNNNNNNEKDIEATTVSGNGTETGQIITTTIGGRDGQPKQTISYMAERVVGTGSFGVVFQAKCLETSEAVAIKKVLQDKRYKNRELQVMRMVDHPNVVKLKHCFYSTTEKDELYLNLVLEYVPETVYKVSKNYIRMHQHMPIIHVQLYTYQILRGLNYLHEVIGVCHRDIKPQNLLVNPQTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSVGCVLAELLLGQAMFPGESGVDQLVEIIKVLGTPTREEIRCMNPNYNEFKFPQIKAHPWHKLFNKRMPSEAVDLVSRLLQYSPHLRCTALAACAHPFFNDLRDPNASLPNGQPLPPLFNFTPQELVNAPEDLRQRLIPEHARS* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1487 472 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 6 472 - -
Mal5g1487 472 CDD STKc_GSK3 138 430 IPR039192 -
Mal5g1487 472 Gene3D Phosphorylase Kinase; domain 1 127 222 - -
Mal5g1487 472 SMART serkin_6 143 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1487 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Mal5g1487 472 ProSiteProfiles Protein kinase domain profile. 143 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1487 472 PANTHER SHAGGY-LIKE KINASE 6 472 - -
Mal5g1487 472 SUPERFAMILY Protein kinase-like (PK-like) 142 454 IPR011009 -
Mal5g1487 472 MobiDBLite consensus disorder prediction 9 25 - -
Mal5g1487 472 MobiDBLite consensus disorder prediction 105 121 - -
Mal5g1487 472 MobiDBLite consensus disorder prediction 92 121 - -
Mal5g1487 472 MobiDBLite consensus disorder prediction 26 57 - -
Mal5g1487 472 Pfam Protein kinase domain 143 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1487 472 Gene3D Transferase(Phosphotransferase) domain 1 223 471 - -
Mal5g1487 472 MobiDBLite consensus disorder prediction 1 64 - -
Mal5g1487 472 ProSitePatterns Protein kinases ATP-binding region signature. 149 173 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1487 Mal-Chr5 28425498 28429848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1487 149 430 Core Cell Cycle Gene Families AT1G76540 35.836 7.62e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Mal5g1487 Pkinase 3.6e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1487 K00924 - gmx:100811346 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1487 5 28425498 28429848 Mal5g1487 5 28425498 28429848 ECH