Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1464 ATGTCTCGTCTTGGGTTTATTGATGTTACTTTGGTTCGTGCCAAAGGCCTTGACAACAATGATTTTCTCCCCAATGCAGATCCTTATGTAATTTTCACATATCGGTCACAGGAGCATAGAAGCACTATGGTGAAAGATTCTAGATCTAATCCACGGTGGGATATTGAGACTTTTCAATTTGTAGTTTTTGATGATGTTTTTGAACTTAATGTGAAATTAATGGCTAAAGAAAGCTTTACTGAGGACGATTTTCTTGGCGAGGCAAAAATTCCTTTCCATTCAATATTTTATGAGGAATACATTCCAGCAACATATTACAGTGTATTTAACAACAATCAAGAATATTGCGGGATGATTCAAGTGGCTCTCGTTTTTTCTCGTGAGGTGTACGGCCGAGCAGGTGCATGA 408 0.3799 MSRLGFIDVTLVRAKGLDNNDFLPNADPYVIFTYRSQEHRSTMVKDSRSNPRWDIETFQFVVFDDVFELNVKLMAKESFTEDDFLGEAKIPFHSIFYEEYIPATYYSVFNNNQEYCGMIQVALVFSREVYGRAGA* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1464 135 Pfam C2 domain 7 98 IPR000008 -
Mal5g1464 135 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Mal5g1464 135 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 5 128 - -
Mal5g1464 135 Gene3D C2 domain 4 126 IPR035892 -
Mal5g1464 135 PANTHER C2 DOMAIN-CONTAINING 5 128 - -
Mal5g1464 135 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 125 IPR035892 -
Mal5g1464 135 SMART C2_3c 6 104 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1464 Mal-Chr5 28106876 28108214 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1464 4 96 C2H2 Transcription Factor Family AT4G21160 29.032 4.63e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1464 - - adu:107473142 130.568