Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1459 ATGGAGGCAGAGAATAAAGAAATCAATTCATTTAAGGATTTGGGTTTAGATGAGTCATTGGTGGAAGCTTGTGAAAAACTCAATTGGAAGACTCCACTGGAGATTCAAGTAGAAGCAATTCCACAAGCGCTACAAGAAAAAGATGTGATTGGAATTTCCGAAACTGGTTCCGGTAAGACTGGAGCTTTTGCTCTTCCTATACTGCATGCCCTCTTAAAAGCACCAGGACGCGGGAACAAATTCTTTGCTTGTGTAATGTCTCCCACAAGGGAGCTTGCATTTCAAATTGCTGATCAGTTTAAGGCTCTAGGTTCTGAAATTGGTGTCAAGTGTGCTGTGCTTGTTGGACAGTTGGACATGGCACAGCAATCCATCGAGATAAGAAAGGGACCTCATATTATTGTTGGGACGCCTGGGCGAGTCGTGGATCACCTAAAAAACACCAAAGAATTTTCTCTTGATAAATTAAAATACTTGGTCTTAGATGAGGCTGACAAGCTGTTGAGTGAGCAATTTGAAAAAACACTTATGGAGTTTTTAGGATTGATTCCTCGTGAGCGGAGAACATTTCTTTTTTCGGCCACAATGACGGAGAAGGTCGAGAAGCTCGAAAAGGTTCATTTAAGGAATCCTGTGAAGATTAAAGTATCATCCAAATATTCTACTGTGGACACACTGAAGCAGCAGTATCTCTTTGTGCCAGCAATGCATAAGGATTGCTACCTTGTATACATTCTCACTGAAAGATCTGGAAGTACATCAATGGTATTCACTGAGAGATGTGATTCGACAACGCTTGTAGCTTTGATGCTTAGGAATCTTGGTTTGAAAGCCATCCCGATTAACGGTCATATGAGTCAACCAAAGAGACTTGGAGCCTTGAATAAGTTCAAGTCTGGCGAATGCAATATTCTCGTTTGCACTGACGTAGCTAGTAGGGGACTTGATATTCCAGCGGTCGATATGGTGATTAACTATAACATTCCCAAACCCAAAGATTATATACATCGTGTAGGAAGGACTGCTCGTGCAGGGCGGTCTGGTATTGCCATTACCCTTGTGAATCAATATGATTTGTTCATGCGGTTATACCATCCGATAGAGGAGCATATAGGCAAGAAGCTAACAGAGTATCCTACAGACAAAGAGGAAGTTTTGCTTTTGAAACAGCGTGTTAAGGAGGCCGCAAGATTAGCAGAAAAGAAAATAAAGGAATCCGGTGAGAAGAAGAAACGGAGGGGCGAAAGAGATTTCGGTGAGGAGGAGGATATTGACAAGTACTTGGGTCTCAAAAGTAAAAGATCATCCAAGAAGTTTAGAAGATAA 1326 0.4163 MEAENKEINSFKDLGLDESLVEACEKLNWKTPLEIQVEAIPQALQEKDVIGISETGSGKTGAFALPILHALLKAPGRGNKFFACVMSPTRELAFQIADQFKALGSEIGVKCAVLVGQLDMAQQSIEIRKGPHIIVGTPGRVVDHLKNTKEFSLDKLKYLVLDEADKLLSEQFEKTLMEFLGLIPRERRTFLFSATMTEKVEKLEKVHLRNPVKIKVSSKYSTVDTLKQQYLFVPAMHKDCYLVYILTERSGSTSMVFTERCDSTTLVALMLRNLGLKAIPINGHMSQPKRLGALNKFKSGECNILVCTDVASRGLDIPAVDMVINYNIPKPKDYIHRVGRTARAGRSGIAITLVNQYDLFMRLYHPIEEHIGKKLTEYPTDKEEVLLLKQRVKEAARLAEKKIKESGEKKKRRGERDFGEEEDIDKYLGLKSKRSSKKFRR* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1459 441 Gene3D - 220 394 IPR027417 -
Mal5g1459 441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 364 IPR027417 -
Mal5g1459 441 Pfam Helicase conserved C-terminal domain 240 345 IPR001650 -
Mal5g1459 441 SMART helicmild6 265 345 IPR001650 -
Mal5g1459 441 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 160 168 IPR000629 -
Mal5g1459 441 SMART ultradead3 28 229 IPR014001 -
Mal5g1459 441 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 225 386 IPR001650 -
Mal5g1459 441 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 40 214 IPR014001 -
Mal5g1459 441 PANTHER RNA HELICASE 4 430 - -
Mal5g1459 441 Coils Coil 389 409 - -
Mal5g1459 441 CDD SF2_C_DEAD 226 354 - -
Mal5g1459 441 MobiDBLite consensus disorder prediction 401 420 - -
Mal5g1459 441 Gene3D - 1 218 IPR027417 -
Mal5g1459 441 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 9 37 IPR014014 GO:0003724
Mal5g1459 441 Pfam DEAD/DEAH box helicase 34 203 IPR011545 GO:0003676|GO:0005524
Mal5g1459 441 PANTHER BNAC02G41920D PROTEIN 4 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1459 Mal-Chr5 28065570 28070301 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1459 8 386 Eukaryotic Initiation Factors Gene Family AT3G19760 29.199 4.67e-56 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1459 K14777 - gmx:100775796 617.461