Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1385 ATGGATCGAGGGGACCAAATGGCGGCATTATCCGGTACTGCATCATACTATATGCAGAGAGGATTACCTGGTTCTGGAAACCAACATGAATTGCATAATTCGCCCGGTATTCGTCAGCTATCGAATACCAATTCACCGTTTCAATCAAGTATTGGCGGTGGTGGTACTATTGGATCCACATTGCCGATGGATTCTTCCGGAATTGCATCTCAATGTATCAATGTAGGTACTCCTTCTGGGGGTGCTGCTTCAACTGGTGAACCTGTGAAAAGGAAGCGAGGAAGGCCTAGGAAATACGGGGCTGATGGAAGTGTGTCGTTAGCATTGACTCCAGCAACACCAGCAAGTCATCCCGGATCTGTACCTCAAGTCCAGAAACGCGGTCGAGGGCGCCCTCTAGGGTCCGGGAAGAAACAACAGTTGGGTTCTGTCGGTGGTTTGATCTCTAGTTCAGCTGGAAATGGTTTCACTCCTCATGTCATATCCATTGCAATTGGAGAAGACATTGCAACGAAAATTCTGGCATTTTCTCAGCAGGGACCTAGAACTATCTTTGTTATGTCTGCCAATGGTGCCGTCTCTACCGTGACGCTTTGTCAGGCTTCAACATCTGGGGGATCTGTCACATATGAGGGTCGTTTTGAGATACTGAGCCTGACAGGCTCTTACTTGGTTGCTGATAACGATGGCTCTCGTAATCGAACGGGGTCATTAAGTGTTTCTCTTGCAAGTCCTGATGGTCGTGTCATTGGTGGAGGCGTCGGTGGACTGCTCATTGCTGCAAGCCCTGTTCAGGTGATAATTGGAAGCTTTATGTGGGGTGGACCGAAGACAAAGAACAAGAAGAATGAAGATTCCGAAGGTCAAGAAGTTGGTATAGAGGCAGATCATCATCATGGAGTTCATAACCCAGTTGCAATGAATAGCATTTCACAAAATCAAAATCTGACTCCAACATCTCTCAATTCTTGGCCTGCATCGCGTCCATTGGATATGCGTAATTCCCATATCGACATTGATTTAATGCGCGGGTGA 1035 0.4715 MDRGDQMAALSGTASYYMQRGLPGSGNQHELHNSPGIRQLSNTNSPFQSSIGGGGTIGSTLPMDSSGIASQCINVGTPSGGAASTGEPVKRKRGRPRKYGADGSVSLALTPATPASHPGSVPQVQKRGRGRPLGSGKKQQLGSVGGLISSSAGNGFTPHVISIAIGEDIATKILAFSQQGPRTIFVMSANGAVSTVTLCQASTSGGSVTYEGRFEILSLTGSYLVADNDGSRNRTGSLSVSLASPDGRVIGGGVGGLLIAASPVQVIIGSFMWGGPKTKNKKNEDSEGQEVGIEADHHHGVHNPVAMNSISQNQNLTPTSLNSWPASRPLDMRNSHIDIDLMRG* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1385 344 CDD DUF296 157 271 IPR005175 -
Mal5g1385 344 ProSiteProfiles PPC domain profile profile. 153 294 IPR005175 -
Mal5g1385 344 Gene3D - 158 300 - -
Mal5g1385 344 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 34 318 - -
Mal5g1385 344 MobiDBLite consensus disorder prediction 19 144 - -
Mal5g1385 344 SUPERFAMILY AF0104/ALDC/Ptd012-like 154 274 - -
Mal5g1385 344 MobiDBLite consensus disorder prediction 19 81 - -
Mal5g1385 344 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 34 318 IPR039605 GO:0003680
Mal5g1385 344 Pfam Plants and Prokaryotes Conserved (PCC) domain 158 271 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1385 Mal-Chr5 24753042 24758030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1385 1 344 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 50.824 4.68e-87 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1385 - - gmx:100799791 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1385 5 24753042 24758030 Mal5g1385 5 24753042 24758030 ECH
Mal3g2684 3 99878394 99883180 Mal5g1385 5 24753042 24758030 PCT