Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1379 ATGGGGATTCAGTGCTCGAGACTCGTTCCATGTTGTGTGAATTCGCAAGTTAAGGCATCGGTTCTTGAAACTCCAGATGCTGAAAATGATGATAGAAGTGAGGCTGGTAATTGGCCTACATTCCGTGAATTTACACTTGAGCAACTTAAGAATGCGACGTCTGGTTTTGCTGTCGAGAATATTGTATCTGAGCATGGAGAGAAGGCTCCAAATGTTGTTTATAAAGGGAAGCTGGAGAATCAAATGAGAATCGCTGTTAAACGGTTTAATAGAAATGCTTGGCCTGATACTCGGCAGTTTTTGGAGGAAGCAAGAGCAGTTGGTCTGCTTCGTAACCAAAGATTGGCAAACTTGCTTGGATGTTGTTGTGAAGGAGATGAGAGGTTGCTTGTGGCAGAATATATGCCAAATGAAACACTTGCAAAGCACCTTTTCCATTGGGAATCACAACCTATGAAATGGGCAATGCGACTAAGGGTTGTTTTACATCTTGCACAAGCTCTAGAGTATTGTACAGGCAAAGGGCGTGCTCTCTATCACGATCTCAATGCGTATAGAGTTCTCTTTGATGAGGATGGTAATCCTAGGCTTTCTACTTTTGGACTTATGAAAAATAGTAGGGATGGAAAAAGTTATAGCACAAATTTGGCATTTACCCCACCAGAATATCTCAGAACTGGGAGAGTAACACCAGAAAGTGTAATATATAGCTTTGGCACTCTTTTGCTTGATCTTCTCAGTGGAAAGCATATCCCCCCGAGTCATGCCCTCGATTTGATCCGGGACAGAAATCTTCAGATGCTGACAGATTCTTGTTTGGAAGGACAATTTTCTGACAATGATGGAACTGAGCTGGTACGCTTGGCATCTCGATGTTTACAGTATGAACCTAGAGAAAGGCCTAATCCTAAATCATTGGTGGCTGCTTTGGCTCCTCTTCAGAAAGAAACTGAGGTACCTTCACATGTATTGATGGGTATCCCACATAGCACCAGTTTTGCATCATTATCACCACTTGGTGAAGCATGTTCAAGAAAGGACTTAACTGCTATACATGAAGTTCTGGATAGTATTGGTTATAAAGATGATGAAGGAGTGGCAAATGAGTTATCATTCCAGATGTGGACTGATCAAATGCAGGACACATTAAATTGCAAGAAAAAGGGGGATGCTGCTTTCCGACAGAAAGAGTTTAGAGAAGCGATCGAGTGCTACACACAGTTCATCGATGCTGGAACAATGGTTTCTCCAACAGTCTATGCACGGCGCAGTTTGTGTTATCTCATAAGCGACATGGCTCAAGAAGGGCTAAACGATGCAATGCAAGCACAAGTTATTTCACCAGTATGGCACATTGCATCATATCTTCAATCTGTTGCACTTGCAACAGTTGGTATGGAGAATCAAGCACAAGCAGCACTGAAAGAAGGCACAACACTCGAATCAAAGCGGAATGCAACTTCGAAACAAAAGTGA 1476 0.4241 MGIQCSRLVPCCVNSQVKASVLETPDAENDDRSEAGNWPTFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDTRQFLEEARAVGLLRNQRLANLLGCCCEGDERLLVAEYMPNETLAKHLFHWESQPMKWAMRLRVVLHLAQALEYCTGKGRALYHDLNAYRVLFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDNDGTELVRLASRCLQYEPRERPNPKSLVAALAPLQKETEVPSHVLMGIPHSTSFASLSPLGEACSRKDLTAIHEVLDSIGYKDDEGVANELSFQMWTDQMQDTLNCKKKGDAAFRQKEFREAIECYTQFIDAGTMVSPTVYARRSLCYLISDMAQEGLNDAMQAQVISPVWHIASYLQSVALATVGMENQAQAALKEGTTLESKRNATSKQK* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1379 491 SUPERFAMILY Protein kinase-like (PK-like) 34 319 IPR011009 -
Mal5g1379 491 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Mal5g1379 491 PANTHER LRR RECEPTOR-LIKE KINASE 1 490 - -
Mal5g1379 491 Gene3D Phosphorylase Kinase; domain 1 30 134 - -
Mal5g1379 491 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Mal5g1379 491 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1379 491 Gene3D Tetratricopeptide repeat domain 380 491 IPR011990 GO:0005515
Mal5g1379 491 SUPERFAMILY TPR-like 384 487 IPR011990 GO:0005515
Mal5g1379 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 490 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1379 Mal-Chr5 24683074 24687607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1379 10 313 Glycoside Hydrolase AT3G07070 33.735 1.70e-44 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Mal5g1379 PK_Tyr_Ser-Thr 2.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1379 K14500 - gmx:100781311 924.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1379 5 24683074 24687607 Mal5g1379 5 24683074 24687607 ECH