Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1353 ATGAACTCAAGGAGAGAAATTGTAAAAGAGGTTAACCCAAGTGGGGTTAGTGATACAATTTATGTTGCCGTGGCTAAAGATGTGAAAGATTGCAAATTAAATGTGATATGGGCAATACAAAATTCTGGAGGAAAGAGAATTTGCATTCTTCATGTGCACGTACCAGCGCCTAAGATCCCTATGATGGGAGCTAAATTTCCAGCAAGTGCATTGACAGAGCAAGAAGTTAAAGCATACAGGGAAATTGAAAGTCAAGACATGCACAAGACTCTTGATGCTTATCTTCTTATTTGTCAAAGAATGGGGGTGAGGGCAAATAAACTGTACATTGAAATGGATTGCATTCAAAAAGGGATTATAGAACTCATCTCCAGATATAACATACAAAACCTTGTAATGGGAGCAGCTTCTGATAAGTACCATTCTAGGAGAATGACAGATCTCAGATCTAAGAAAGCCATCTATGTATGTGAACAAGCTCCAGCTTCTTGTCATATACAATTTATCTGCAAAGGGTATCTTATACAGACAAGGGATTGCATTTTGGATAAATTCAGAGTAGAGGGCACATCTCCTTTGGTGCAGCAAATGCAAAATTCTGAAGTTGGTCACTCACCTCACTTGAGATCTAGATCAATTTCACATGATCAAGAGTTACATCATCATAGACTAAGATCTATCAGCTTTGCATCCGGAAATGGAAGGAGCATGGCATCATCTGTTTCTTCTTCAGAACGGTTTTCATCTCAACAAAGCAAGTTGGATAGAGAAACAATTTGGAGTCCTTCACCGTCGTCGGTTGAAACAGCATTGACACCGAATTTGATTAGTGATGGCAGTGAGAGTTTGTTGGACTTGAAAATGAGTTACCTATCTAGTATTAAAGAGGAAAATCTTTGTCATTCATCACCTCCTAGTGTGCTGGATAGAGGAATGGACGATAGTGTGTATGATCAACTTGAACAGGCTATCGCGGAGGCTGAGAAGGCTAGATGGGATGCGTATCAAGAAACTGTTAGGCGTCGCAAAGCTGAAAAAGATGTCATTGATAATATACGCAAGACTAGAGAAACCAAAATCTTGTATGAAGAAGACGTAAAACTAAGGAAAGATTTAGAGGAAGCACTACAGAAAGCGAAAGAAGAAATTGACAACATGAAAAGAAAAATAGACAAAGTCAATAAGGAACTCCAACTTGCCTTAGATCACAAGTCATCAACGGAGAATCAAATTGGTGAGGCATCAAGAACACATTCTCTTCAACTTTTGTCAGAGTTTTCATTTTCAGAGATTGAAGAAGCAACATGTAACTTCAATCCATCGTTAAAGATTGGTGAAGGTGGATACGGAAAGATATATAAAGGCATCCTTCGTCACACCGAGGTGGCTATAAAAATTTTGAGCCCTAACAGCACTCAAGGACCCTCAGAATTTCAACAGGAGGTTGAAGTATTGAGCAAGTTAAGGCATCCTAATCTTATCACACTTATAGGAGCAAACCAAGAATCAAAGACTCTTATATATGAGTATTTACCAAATGGAAGCCTCGAAGATTGTCTCAACCGCAAGGACAATAATACCCCTCCATTATCATGGCAGACTCGAATTCGCATTGCGACGGAACTATGTTCTGCTCTAATCTTTCTCCATTCCAATAAACCTCACAGCATAGTCCATGGTGACTTAAAACCTTCCAACATTCTCCTTGATGCAAACCATGTAACCAAGCTTAGCGACTTCGGAATCTGTCGTGTATTATCATGTCAAAACGATTCTTCTTCTAGTAACAACAGTACACAATTTTGGATCACTAATTTTGCAAAGGGAACTTTTGCATACATGGATCCTGAATTCTTCGGTACAGGCGAACTTACTTCGAAGTCAGATGTTTATTCATTTGGAATTGTTTTGTTAAGATTAATAACTGGAAAACCAGCTTTAGGAATAAAGAATGAAGTGTTATATGCATTGAATAATGCTGGTGGAGAGGTGAAATCACTTTTGGATCCTTTTGCTGGAGATTGGCCAATTGTGGAAGCTGAAAAGTTGGTTCACTTGGCTTTGAGGTGTTGTGATATGAATAGAAAGAGTAGGCCAGAGCTTTGTTCAGATGTTTGGAGAGTGTTGGAACCAATGAAGGCTTCTTTTAGTGGAAAAAACAACTTTGGACTTGAGTCATGTTTGGATAAACAGCTTAACAGGACAAAATTCTAA 2214 0.3871 MNSRREIVKEVNPSGVSDTIYVAVAKDVKDCKLNVIWAIQNSGGKRICILHVHVPAPKIPMMGAKFPASALTEQEVKAYREIESQDMHKTLDAYLLICQRMGVRANKLYIEMDCIQKGIIELISRYNIQNLVMGAASDKYHSRRMTDLRSKKAIYVCEQAPASCHIQFICKGYLIQTRDCILDKFRVEGTSPLVQQMQNSEVGHSPHLRSRSISHDQELHHHRLRSISFASGNGRSMASSVSSSERFSSQQSKLDRETIWSPSPSSVETALTPNLISDGSESLLDLKMSYLSSIKEENLCHSSPPSVLDRGMDDSVYDQLEQAIAEAEKARWDAYQETVRRRKAEKDVIDNIRKTRETKILYEEDVKLRKDLEEALQKAKEEIDNMKRKIDKVNKELQLALDHKSSTENQIGEASRTHSLQLLSEFSFSEIEEATCNFNPSLKIGEGGYGKIYKGILRHTEVAIKILSPNSTQGPSEFQQEVEVLSKLRHPNLITLIGANQESKTLIYEYLPNGSLEDCLNRKDNNTPPLSWQTRIRIATELCSALIFLHSNKPHSIVHGDLKPSNILLDANHVTKLSDFGICRVLSCQNDSSSSNNSTQFWITNFAKGTFAYMDPEFFGTGELTSKSDVYSFGIVLLRLITGKPALGIKNEVLYALNNAGGEVKSLLDPFAGDWPIVEAEKLVHLALRCCDMNRKSRPELCSDVWRVLEPMKASFSGKNNFGLESCLDKQLNRTKF* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1353 737 SUPERFAMILY Protein kinase-like (PK-like) 419 710 IPR011009 -
Mal5g1353 737 PANTHER U-BOX KINASE FAMILY PROTEIN 409 723 - -
Mal5g1353 737 CDD STK_N 19 172 - -
Mal5g1353 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 557 569 IPR008271 GO:0004672|GO:0006468
Mal5g1353 737 PANTHER U-BOX KINASE FAMILY PROTEIN 3 397 - -
Mal5g1353 737 Coils Coil 317 337 - -
Mal5g1353 737 SMART serkin_6 438 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1353 737 Coils Coil 362 410 - -
Mal5g1353 737 Gene3D Phosphorylase Kinase; domain 1 408 510 - -
Mal5g1353 737 PANTHER OS02G0152300 PROTEIN 3 397 - -
Mal5g1353 737 ProSiteProfiles Protein kinase domain profile. 438 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1353 737 MobiDBLite consensus disorder prediction 232 267 - -
Mal5g1353 737 Gene3D Transferase(Phosphotransferase) domain 1 511 718 - -
Mal5g1353 737 PANTHER OS02G0152300 PROTEIN 409 723 - -
Mal5g1353 737 ProSitePatterns Protein kinases ATP-binding region signature. 444 465 IPR017441 GO:0005524
Mal5g1353 737 Pfam Protein kinase domain 442 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1353 Mal-Chr5 24128364 24136586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1353 16 724 U-box Gene Family AT2G45910 46.579 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mal5g1353 Pkinase 5.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1353 - - mtr:MTR_8g030690 1109.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1353 5 24128364 24136586 Mal5g1353 5 24128364 24136586 ECH
Mal5g1353 5 24128364 24136586 Mal3g2707 3 100406996 100412440 ECH
Mal3g2707 3 100406996 100412440 Mal5g1353 5 24128364 24136586 PCT