Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1331 ATGATAAACCCTTTTTTTTTTTTGCTGTGTAATGTAATAAACTTTTCATATGAATTAAATAATATTAAAGTTGATTTGTACAAGCTGCTGACTGTTGTTGAGGGAAAAGGTGGGTTTGAAGCTGTTTGTGATGGAGGGTTGTGGGATTTGGTTGGAGAAGAATGTGGCTTAGGTTTGAATGTTGGTTCGTCGGTGAAACTGGTTTTTAGCAAGTATAAGAGTGTTTTGGAGTCATCTGTGAAGAAAGGTGGTGATTGTAAGATGTTTGATGAGAGTGGTTTGATGGCGTTTGAGGCTGATGTGAATGAGTTGTTGCCGGGTCAGGGTGGGAATGTGGTGACTGGAGAGGAGGTTAAGGGTGGAGTTGATGGTGCGAATGTGGTGGCTGGAGAGGAGGTTAATGGTGGAGTTGATGGTGCGAATGAGGTGAAGAGTGTGAATTTTGAGTCTGGAAGTCTTGATTCGGGAATGAAGAACGGTGGGACTGTTAATGAAACCGATGTTGGAAAGCTGAGTGAGGGCAATGCTGATGCAATGAAAGTAGCTGAAGAGGTTGATGAAGGGGAAATGACTGTAGGGACAACTGTGGATGCGTCTGATTTGGTGAAGAGTGGTGAGTCTGGATTGCTGAATGTAGGCGAGAATCGTGAAGGTGCTGTCGGTGATAATAGTGTCCCGGTATTGGATTTGTCTGGTGGTGATGGAAGTAGTTCTGGTGTTAAGAGGAAGAGAGAGGAGTCTTTGTATGATTTGATGAGTTGGGTTACTAAAACCGCGAATAACCCTTGTGATCCTGAAATTCTTCCGATGCCTGAAAAGTCGAAGTGGAACGCTTCAAGTAATCAGGGGCCATGGAAGCAGGTTCTGTTGTTTCGAGAGGCCGCGTTTCACAAAAAAGAGTCGAGCAGTGAACAGAAAAATTGGCAGAGTCAGAAGATGCATCCTTGCTTGTATGATGATCCCGCTCCGAAAAACTACAATCTTAGGCAGAGGGTGAAACGTGACAAGAAATCATTTGAAAAACAAAAACAAGCTTCACGAAGCACGTCAAATTCATCTGTGCTAGGTGAAGGAGATTCAGATGGAACCTCAAGTCAGTTGCTTGCTTACACAAGTAAACGTTCACGTTCTAATAGGTGGGCATCAGCGCGCATCCGTGTGGGGCCAACTTATCAAGCTCAAGTGTCAGAGTGGACTGGCACGACTTCTGAAAGTGATCCTAAGTGGTTTGGGACCCAAGTATGGCCATCACAGACAGTAAGTTCCCGATTTCTTATTGAAAGGGATCCCATAGGAAAGGGAAGACCAGATTCGTGCGGCTGTGCAGTCCCGGGATCTGTCGATTGTGTCAGATTCCATATTTCTGAGAAAAAAGCTAAAGTTAAGCTGGAGTTAGGCGTGGCTTTTAACCATTGGCAATTTGATAAGGTAGGTGAAGATGTCCGGCATTTCTGGACAAATGAAGATGAGAAAAAGTTCAGGGAAGTGATACAATTTAACCCTGTAATTCAATATTCTGAGAATCATTTCTGGGATCATCTTTTTGAAGCATTTCCTAATAAGAGCAGGGAAACTTTGGTTAGCTACTACTTCAATGTCTATCTTTTGCAACGGAGAGCATACCATACTAGGCATGCTGATAACATTGACAACTATCGCAGCGACGATGGCGAATATGAATCTACATTGAGGGGGGCTTTTGGACGTGGGGCAAAGAAGCCCTAG 1725 0.4388 MINPFFFLLCNVINFSYELNNIKVDLYKLLTVVEGKGGFEAVCDGGLWDLVGEECGLGLNVGSSVKLVFSKYKSVLESSVKKGGDCKMFDESGLMAFEADVNELLPGQGGNVVTGEEVKGGVDGANVVAGEEVNGGVDGANEVKSVNFESGSLDSGMKNGGTVNETDVGKLSEGNADAMKVAEEVDEGEMTVGTTVDASDLVKSGESGLLNVGENREGAVGDNSVPVLDLSGGDGSSSGVKRKREESLYDLMSWVTKTANNPCDPEILPMPEKSKWNASSNQGPWKQVLLFREAAFHKKESSSEQKNWQSQKMHPCLYDDPAPKNYNLRQRVKRDKKSFEKQKQASRSTSNSSVLGEGDSDGTSSQLLAYTSKRSRSNRWASARIRVGPTYQAQVSEWTGTTSESDPKWFGTQVWPSQTVSSRFLIERDPIGKGRPDSCGCAVPGSVDCVRFHISEKKAKVKLELGVAFNHWQFDKVGEDVRHFWTNEDEKKFREVIQFNPVIQYSENHFWDHLFEAFPNKSRETLVSYYFNVYLLQRRAYHTRHADNIDNYRSDDGEYESTLRGAFGRGAKKP* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1331 574 CDD SANT 485 533 IPR001005 -
Mal5g1331 574 ProSiteProfiles ARID domain profile. 1 81 IPR001606 GO:0003677
Mal5g1331 574 SUPERFAMILY ARID-like 19 72 IPR036431 GO:0003677
Mal5g1331 574 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 21 568 - -
Mal5g1331 574 MobiDBLite consensus disorder prediction 212 242 - -
Mal5g1331 574 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1 21 568 - -
Mal5g1331 574 MobiDBLite consensus disorder prediction 301 365 - -
Mal5g1331 574 Gene3D - 9 88 IPR036431 GO:0003677
Mal5g1331 574 MobiDBLite consensus disorder prediction 326 343 - -
Mal5g1331 574 CDD ARID 19 72 - -
Mal5g1331 574 MobiDBLite consensus disorder prediction 344 365 - -
Mal5g1331 574 SMART ELM2_2 385 436 IPR000949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1331 Mal-Chr5 23369170 23374480 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mal5g1331 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1331 - - mtr:MTR_8g028905 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2730 3 100736978 100741221 Mal5g1331 5 23369170 23374480 PCT