Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1330 ATGTTCCTCCTTTTCCTCTTCCTTCTCTTACCTCACTTCACTCTTTCCAACATCATTATTTTATCACAAAACCAAACCCTCTTAAGCCAAAATCAAACCTTTGAACTTGGTCTCTTCAACTTTGAACAACAAAAACAAAACCAACAACGTTATTATCTTTCTATTCGTTTCACTTCTCAATCTTCCCCAAACATCATTTGGGTCGCTAACCGTAACAAACCCATTTCATCTCTCACCGGTTCGAACCTTCAATTAACCCGAACCGGTCAATTACTCTTGACCCAAAACGACACCGTTTTATGGCAAACCCAAAACAACAACACTCTTGAATCTCTTCTTCAACTGAACCTTCTAGAAAACGGAAACTTAATTCTGGAAACTAAAAACGGTGTCGTTTTATGGCAAAGCTTTGATGAACCAACTGACACGTGGCTACCAGGTATGAACTTAACTAGGGTTCATAACCTACTCTCATGGCGCACGTTAACAAACCCTAGTAATGGTTATTATTCACTGCGGTTAAAACCACCAAATTATGGTGAATTTGAGCTTGTTTTTAACGGCACAGTTTCGTATTGGGACACCGGTAACTGGAATGGCAAGGCATTTGCCGGTGTTCCTGAGATGGCGGTGCCGTATCTTTATAGGTTTGATTTTGAAGATGCTTATTCGCCGATGGCGTCGTTCGGATTCTCTGAAGGGACTATGGATAACGGTGTTAGACCGCCGACGATGTTTAGGGTTGAGCCGTTTGGGCAGGTGAGGCAGTATACGTGGTCGAATCAGGCGGGTTCGTGGAATATGTTTTGGTCGAGACCGGAGTCAATTTGTTCGGTGAAGGGTGTTTGTGGGAGGTTTGGTGTTTGTATTGGCGAGGTTTCCAGGGTTTGTGAGTGTGTTAAGGGTTTTGTGGCGGTGGACGGTGATGGTTGGAGTTCCGGGGATTATTTGGGTGGTTGTTGGAGAGGGGAGAGGGTTTGTGATGAAAGTGATGGTTTTGAAGATTTGGGTGTTGTTAGGTTTGGTTTTGACAATGTGAGTACTTTTAGAGCTAAATCTAGAAGCTTATGTGAGCGTGGTTGTTTGAGTTCTTGTGATTGTGTTGGTTTGAGTTTTGATGAAAAGAGTGGTTTTTGTAGGAATTATTTTGGGTCTCTTTTTGATTTTCAAAATTTGACTGCTTTGGAGAGTGGTGGTGGTGTTGGCGATGGGAATGTGTTGTATGTTAGGGTTCCTGGTGAGGGATCTGAGGGGAAGATTAAGAGGTTGAATGGTAAGGTTTTGAGTGGTGTTATAATTGGGTGTGTTTTGTTTTTGGTTTTGGTTTTGGGTGTGGTGGTGGTGACTTTGGTGGTGCTGGCGAAGAGGAAGAGATTGAATAAGGAGAAAGAGAATGGGTTGGAGGAAGATGGGTTTGTTCCTGTGCTGAATTTGAAGGTGTTTTCTTACAAGGAGCTTCAATTGGCGACACGAGGGTTTTCCGAGAAAGTTGGGCATGGTGGGTTTGGGACGGTGTTTCAAGGTGAATTGAGTGATTCTACAGTTGTTGCGGTGAAGCGTTTGGAGAGGCCGGGAGGTGGAGAGAAAGAGTTTAGGGCCGAGGTTTCCACAATTGGGAACATTCAACATGTTAATCTTGTGAGGCTAAGAGGTTTTTGCTCTGAGAATGCGCATCGACTTTTGGTTTATGAGTACATGTCGAATGGCGCCCTCAGTGCTTATCTGCGAAGGGATGGGCCGTGTTTGAGCTGGGATGTTAGGTTCAGGGTAGCAATTGGAACTGCTAAAGGCATAGCATATTTACACGAGGAATGTAGAAGCTGCATTATACATTGTGATATCAAACCTGAAAACATTCTTTTGGATAGTGATTTCACCGCCAAGGTTTCTGATTTTGGATTGGCAAAGCTCATTGGCAGGGACTTCAGCAGGGTGTTGGCAACAATGAGAGGTACTTGGGGATATGTAGCACCAGAGTGGATTTCCGGCGTTGAAATTACAACTAAAGCTGATGTTTACAGCTATGGTATGACATTACTAGAACTCGTAGGCGGTCGCCGGAATGTTGAGGCACCACCTTCGTCTGGTGATAGAAAGAGTGAATGTGAGACAGGAGATAAATGGTTCTTTCCTCCATGGGCAGCGCAGCTGATAATCGATGATAATGTAGCTGCTGTCGTTGATAAGAAGCTTGGAAATGTATATAACATTGAGGAGGCTAAGAGGGTTGCTTTGGTAGCAGTTTGGTGCATTCAGGATGATGAGGCAATGAGACCCACCATGGGTATGGTGGTGAAAATGTTAGAAGGGTTAGTGGAGGTGGCTCTTCCACCGCCGCCTAAGTTGCTACAAGCGTTGGTTACTGGAGAGTCCTTTCGTGGTGTCAAGATTGATTCGAGTAATGCGGTTTCTACCGCTGGCAGTTCATCTTGCTACGACAACATGGAAGTGTCAGCTGCTGATTCAGAATCATGTATAGGAGAAGTTTTTTCCCCACTGGATGGCATTGTCAATGTTCGATAA 2523 0.4427 MFLLFLFLLLPHFTLSNIIILSQNQTLLSQNQTFELGLFNFEQQKQNQQRYYLSIRFTSQSSPNIIWVANRNKPISSLTGSNLQLTRTGQLLLTQNDTVLWQTQNNNTLESLLQLNLLENGNLILETKNGVVLWQSFDEPTDTWLPGMNLTRVHNLLSWRTLTNPSNGYYSLRLKPPNYGEFELVFNGTVSYWDTGNWNGKAFAGVPEMAVPYLYRFDFEDAYSPMASFGFSEGTMDNGVRPPTMFRVEPFGQVRQYTWSNQAGSWNMFWSRPESICSVKGVCGRFGVCIGEVSRVCECVKGFVAVDGDGWSSGDYLGGCWRGERVCDESDGFEDLGVVRFGFDNVSTFRAKSRSLCERGCLSSCDCVGLSFDEKSGFCRNYFGSLFDFQNLTALESGGGVGDGNVLYVRVPGEGSEGKIKRLNGKVLSGVIIGCVLFLVLVLGVVVVTLVVLAKRKRLNKEKENGLEEDGFVPVLNLKVFSYKELQLATRGFSEKVGHGGFGTVFQGELSDSTVVAVKRLERPGGGEKEFRAEVSTIGNIQHVNLVRLRGFCSENAHRLLVYEYMSNGALSAYLRRDGPCLSWDVRFRVAIGTAKGIAYLHEECRSCIIHCDIKPENILLDSDFTAKVSDFGLAKLIGRDFSRVLATMRGTWGYVAPEWISGVEITTKADVYSYGMTLLELVGGRRNVEAPPSSGDRKSECETGDKWFFPPWAAQLIIDDNVAAVVDKKLGNVYNIEEAKRVALVAVWCIQDDEAMRPTMGMVVKMLEGLVEVALPPPPKLLQALVTGESFRGVKIDSSNAVSTAGSSSCYDNMEVSAADSESCIGEVFSPLDGIVNVR* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1330 840 ProSiteProfiles PAN/Apple domain profile. 327 406 IPR003609 -
Mal5g1330 840 Gene3D Transferase(Phosphotransferase) domain 1 566 775 - -
Mal5g1330 840 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 14 828 - -
Mal5g1330 840 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Mal5g1330 840 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-2 14 828 - -
Mal5g1330 840 Pfam D-mannose binding lectin 65 153 IPR001480 -
Mal5g1330 840 Gene3D Phosphorylase Kinase; domain 1 453 565 - -
Mal5g1330 840 Pfam Protein kinase domain 494 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1330 840 Pfam S-locus glycoprotein domain 193 305 IPR000858 GO:0048544
Mal5g1330 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Mal5g1330 840 ProSiteProfiles Protein kinase domain profile. 491 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1330 840 SUPERFAMILY alpha-D-mannose-specific plant lectins 51 199 IPR036426 -
Mal5g1330 840 ProSiteProfiles Bulb-type lectin domain profile. 12 138 IPR001480 -
Mal5g1330 840 SMART blect_4 20 140 IPR001480 -
Mal5g1330 840 CDD PAN_AP_plant 328 412 - -
Mal5g1330 840 SUPERFAMILY Protein kinase-like (PK-like) 474 769 IPR011009 -
Mal5g1330 840 CDD STKc_IRAK 497 771 - -
Mal5g1330 840 Gene3D - 12 137 IPR036426 -
Mal5g1330 840 PIRSF SRK 1 823 IPR024171 GO:0004674
Mal5g1330 840 SMART serkin_6 491 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1330 Mal-Chr5 23331562 23334084 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1330 481 778 Receptor kinase-like Gene Family AT5G20050 46.624 3.10e-81 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mal5g1330 Pkinase 4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1330 - - lja:Lj0g3v0252549.1 1179.47