Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1327 ATGACTACAACGTTTGTCCATAACCGGAGCCAACACTCCGGTAACCGGAGCACGCCGGACAGAATGTCTCGTTCTTCTGACTTCAGCACCTCTCAGTACTCAACCACCTCCTCTTCTTCCTCCGGCAGCCGGAATCCGGTTGTTGCCGCCGCCATGTCGGTTGCTGGATTGTTTGCCTCTTGTTTTACCCCGCCGGATAGTAGCAATTCCAAAAGTGTTGTAGATTCTGAGGAGTTCAAATCTACTTCTGTTGCATCAAATGCTTCAAGAGCTGGTAGTCAGAGAGGGCGTGGCTCAAATCGAGGCACCAACATCAGTTTATACAACACAATCCAGGGGAATGAGTCTGGCATTGTCAAGTACACCATGGAGGAAATCATACAAGTCACAAGAAACTTCTCTCCTTCTTTCAAGATTGGTCAAGGTGGTTTTGGGGCTGTCTACAAGACCAAACTCCTGGATGGAACTATTGTTGCAGTAAAGCGTGCTAAGAAGAGTGTACACGAGAAACATTTAGGTTCGGAGTTCCAGAGCGAGGTCCAAACACTATCAAGGGTTGAACATTTGAACTTGGTAAAGTTCTATGGATATTTGGAGCAAGGGGATGAAAGAATCATTGTTGTGGAGTATGTTCCTAATGGAACCCTCAGAGAACATTTAGATTGTATTCATGGAAATGTTCTCGACCTCGCTGCTCGTCTAGACATTGCAATTGATGTATCTCATGCTCTCACTTATCTTCATATGTATATGGATCATCCTATCATTCATAGAGACATAAAATCTTCCAACATTCTCCTCACCGAGAATTTTCGAGCTAAGGTAGCAGACTTTGGTTTTGCTAGACAGGCACCTGACAGCGACTCTGGCATGACTCATGTCTCCACCCAAGTTAAGGGAACAGCTGGCTACTTGGATCCTGAATACTTGAAAACCTATCAACTAACCGAAAAGAGTGACGTCTATTCATTCGGTGTTTTGCTTGTTGAACTTGTCACAGGCAGACGCCCCATTGAACCAAAATTTGAACTCAAAGAGAGAATAACAGTAAAATGGGCTATGAAGAGGTTTATTGACGGAAACGCAATCTCAGCCTTGGACCCGAGAATGGATCAAACTTCAGCAAATAATTTGGCCTTAGAAAAGATACTTGAACTAGCTTTACAGTGCTTGGCTCCACATAGACAAAACAGGCCTAACATGAAGAGATGTGCTGAGATCCTTTGGGCCATTCGCAAGGACTACAGAGAGCTATCGGCTTCAAACTTTCGATCATATTCCACTACTTCCCAAAGGAGCGCCTCATTGAGAGGGTGA 1317 0.4465 MTTTFVHNRSQHSGNRSTPDRMSRSSDFSTSQYSTTSSSSSGSRNPVVAAAMSVAGLFASCFTPPDSSNSKSVVDSEEFKSTSVASNASRAGSQRGRGSNRGTNISLYNTIQGNESGIVKYTMEEIIQVTRNFSPSFKIGQGGFGAVYKTKLLDGTIVAVKRAKKSVHEKHLGSEFQSEVQTLSRVEHLNLVKFYGYLEQGDERIIVVEYVPNGTLREHLDCIHGNVLDLAARLDIAIDVSHALTYLHMYMDHPIIHRDIKSSNILLTENFRAKVADFGFARQAPDSDSGMTHVSTQVKGTAGYLDPEYLKTYQLTEKSDVYSFGVLLVELVTGRRPIEPKFELKERITVKWAMKRFIDGNAISALDPRMDQTSANNLALEKILELALQCLAPHRQNRPNMKRCAEILWAIRKDYRELSASNFRSYSTTSQRSASLRG* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1327 438 MobiDBLite consensus disorder prediction 68 104 - -
Mal5g1327 438 PANTHER CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 2 6 427 - -
Mal5g1327 438 MobiDBLite consensus disorder prediction 1 45 - -
Mal5g1327 438 Pfam Protein kinase domain 138 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1327 438 Gene3D Phosphorylase Kinase; domain 1 96 210 - -
Mal5g1327 438 ProSiteProfiles Protein kinase domain profile. 133 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1327 438 ProSitePatterns Protein kinases ATP-binding region signature. 139 165 IPR017441 GO:0005524
Mal5g1327 438 SUPERFAMILY Protein kinase-like (PK-like) 116 411 IPR011009 -
Mal5g1327 438 Gene3D Transferase(Phosphotransferase) domain 1 211 433 - -
Mal5g1327 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Mal5g1327 438 PANTHER RECEPTOR-LIKE PROTEIN 55 6 427 - -
Mal5g1327 438 CDD STKc_IRAK 139 408 - -
Mal5g1327 438 SMART serkin_6 133 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1327 Mal-Chr5 23281128 23284449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1327 79 411 Trihelix Transcription Factor Family AT1G70460 40.950 1.20e-69 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Mal5g1327 Pkinase 2.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1327 - - cam:101500599 746.503