Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1317 ATGGATACTCCTAGTTTCACCTTTGTACTCTATACCCTCTTTCTTACTCTTTCTGTTTCTGTTTCTGTTTCTTCATCATCACTTCCTATGTCTTTGAAAACACAAGCTTCTATCTTAGTTTCTCTCAAACAAGATTTTGAATCCAAAACTTCTTTAAAAAGTTGGAATATCTCTAACTACATGTCCCTTTGTACTACTTGGTATGGTATTCAATGTGACACAAACAATAGTTCTGTTGTGTCACTAGACATATCAAACTTGAATGTTTCTGGAACTTTTTCATCTTCCATCACAAAACTATCAAACTTGAGATTTCTCAACATATCCAACAATATGTTCAATGGAAATCTAAGTTGGAAATTCTCTCATTTGAAAGATCTTGAAGTTCTTGATGCTTACAACAATGAGTTCAATTGTTCACTCCCTATTGGTGTCACTGAGTTACCTAAACTCAAGTACTTGAATTTTGGAGGAAATTTTTTCTATGGAGAAATTCCTTCAAAATATGGAAACATGTTGCAGCTTAATTATCTGTCTCTTGCAGGTAATGATTTGAGAGGTTTCATACCCTTTGAGCTTGGAAATCTTACTAATCTTACACACCTTTTGTTAGGTTATTACAATGAGTTTGATGGTGAAATTCCACCTCATTTTGGTAACCTTGTTAATTTAGTTCATCTTGATCTTGCAAACTGTGGTTTGAAAGGTTCAATTCCACAAGAGTTAGGAAAACTTTACAAACTAGACACACTTTTCTTGCAAACCAATCAACTTAGTGGTTCAATTCCACCTCAACTAGGGAATCTTAGTAGTTTGAAATCACTTGATATGTCAAACAATGAGTTAATTGGAGACATACCTAATGAATTTTCAAATCTTCATGAACTTACACTTTTGAACTTGTTCATCAACAAATTCAATGGTGAAATTCCATCTTTTGTTTCTGAGTTACCAAATTTGGAAGTGTTGAAGCTTTGGCATAACAACTTCACAGGTGTTATTCCTTCAAAGCTAGGACAGAATGGTAAATTGACTGAGCTTGATCTTTCAACAAATAAACTCACTGGATTAGTACCTAAATCTTTATGCATTGGAAAAAAGCTTAAGATTTTGATTTTGCTCAACAATTTTCTGTTTGGTTCTTTGCCTTATGAACTTGGTCAATGTTACACACTTCAAAGAGTTCGTTTAGGACAAAACTATTTAACAGGTTCAATACCAAAAGGTTTTCTTTATTTACCTCAACTTTCACTTCTTGAACTACAGAACAATTTTCTTAGTGGGTTTCTTCCACAGCAAGAAAGAACAAACACCAACACTTCTAAACTTGGAGAGATGAATCTATCGAACAATCGTTTATCCGGATCTTTACCAAATTCTATTGGAAACTTTCCAAACTTGCAAATTCTGCTTCTTCATGGAAATAGATTCTCAGGTGAAATCCCTTCAGATATAGGAAAGTTGAAGAACATTCTCAGGTTGGATATGAGTTTCAACAACTTTTCAGGAACTATTCCTATTGAAATAGGTAAATGTTCTTCACTTACCTTTTTGGATTTGAGTCAGAACAAATTATCAGGTCCTATTCCAATTCAGGTTTCTCAAATTCACATACTTAACTATCTTAATGTCTCATGGAACAACCTAAACCAAACACTCCCAAAGGAACTTGGTTCTATTAAGGGCTTAACTTCAGCTGATTTCTCTCACAATGACTTCTCTGGCTCAATTCCTGAAATAGGACAATTCTCAATGTTCAATTCTACATCCTTTATCGGTAATCCAAAGTTATGTGGATATGATTTGAATCCATGCAACCAATCTTCATCAGAAACATTAGAGTCTGAGAAAAATGGTGAGAAACATGGAATTCCTGCGAAGTATAAGCTTCTATTTGCATTAGCACTTTTGGTTTGTTCATTGGTTTTTGCAACCTTTGCTATCATCAAGGGTAGAAAAGGAATTAGGAGGGACTCAAATTCATGGAAGTTAACAGCATTTCAGAAGATTGAATATGGCAGTGAAGACATTTTAGGATGTGTAAAGGAAAGTAACATCATAGGAAGAGGTGGTGCTGGTGTTGTATATGAAGGAACAATGCCAAATGGTGAAAAAGTAGCTGTGAAGAAATTGTTAGGAATTAACAAAGGTTGTTCTTATGATAATGGTTTATCAGCTGAAATAAAAACACTTGGTAGAACAAGGCACAGGTACATTGTGAAGTTGTTAGCATTTTGTTCAAATAGAGACACAAATTTGCTTGTTTATGAGTACATGACAAATGGTAGTTTAGGTGAAGTGTTGCATGGGAAAAGAGGGGGGTTTCTTGAGTGGGATGTTAGGGTGAAAATAGCAACTGAAGCTGCTAAAGGACTTTGCTATTTGCACCATGATTGTTGTCCTTTGATTGTTCATAGAGATGTTAAGTCAAATAACATATTGTTGAACTCTGAGTTTGAGGCTCATGTTGCTGATTTTGGACTTGCTAAGTTCTTGTTGCAAGATACTGGTGGGACTTCTGAGTGCATGTCTTCTATTGTTGGTTCTTATGGCTACATTGCTCCAGAATATGCATACACATTGAAAGTGGATGAGAAAAGTGATGTATACAGCTTTGGAGTGGTGCTCTTAGAACTTTTAACAGGAAGAAGACCAGTGGGAGATTTTGGTGAAGAAGGAATGGATATTGTTCAATGGACAAAGTTACAAACTGATTGGAACAAAGAAAGTGTGGTGAAGATTCTTGATGGGAGGTTACATAACAATATTCCTTTAGATGAAGCAATGCAGTTATTCTTTGTAACTATGTGTTGTGTTCAGGAACAAAGTGTGGAACGACCAACCATGAGGGAAGTGGTTGAAATGCTAGCACAAGTAAAGCAACCAAATATGTTTCAAGTGTAA 2904 0.3516 MDTPSFTFVLYTLFLTLSVSVSVSSSSLPMSLKTQASILVSLKQDFESKTSLKSWNISNYMSLCTTWYGIQCDTNNSSVVSLDISNLNVSGTFSSSITKLSNLRFLNISNNMFNGNLSWKFSHLKDLEVLDAYNNEFNCSLPIGVTELPKLKYLNFGGNFFYGEIPSKYGNMLQLNYLSLAGNDLRGFIPFELGNLTNLTHLLLGYYNEFDGEIPPHFGNLVNLVHLDLANCGLKGSIPQELGKLYKLDTLFLQTNQLSGSIPPQLGNLSSLKSLDMSNNELIGDIPNEFSNLHELTLLNLFINKFNGEIPSFVSELPNLEVLKLWHNNFTGVIPSKLGQNGKLTELDLSTNKLTGLVPKSLCIGKKLKILILLNNFLFGSLPYELGQCYTLQRVRLGQNYLTGSIPKGFLYLPQLSLLELQNNFLSGFLPQQERTNTNTSKLGEMNLSNNRLSGSLPNSIGNFPNLQILLLHGNRFSGEIPSDIGKLKNILRLDMSFNNFSGTIPIEIGKCSSLTFLDLSQNKLSGPIPIQVSQIHILNYLNVSWNNLNQTLPKELGSIKGLTSADFSHNDFSGSIPEIGQFSMFNSTSFIGNPKLCGYDLNPCNQSSSETLESEKNGEKHGIPAKYKLLFALALLVCSLVFATFAIIKGRKGIRRDSNSWKLTAFQKIEYGSEDILGCVKESNIIGRGGAGVVYEGTMPNGEKVAVKKLLGINKGCSYDNGLSAEIKTLGRTRHRYIVKLLAFCSNRDTNLLVYEYMTNGSLGEVLHGKRGGFLEWDVRVKIATEAAKGLCYLHHDCCPLIVHRDVKSNNILLNSEFEAHVADFGLAKFLLQDTGGTSECMSSIVGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELLTGRRPVGDFGEEGMDIVQWTKLQTDWNKESVVKILDGRLHNNIPLDEAMQLFFVTMCCVQEQSVERPTMREVVEMLAQVKQPNMFQV* 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1317 967 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Mal5g1317 967 ProSiteProfiles Protein kinase domain profile. 681 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1317 967 PANTHER UNNAMED PRODUCT 9 103 - -
Mal5g1317 967 Gene3D Ribonuclease Inhibitor 380 481 IPR032675 -
Mal5g1317 967 SMART serkin_6 681 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1317 967 Gene3D Ribonuclease Inhibitor 188 285 IPR032675 -
Mal5g1317 967 Gene3D Ribonuclease Inhibitor 286 379 IPR032675 -
Mal5g1317 967 SUPERFAMILY Protein kinase-like (PK-like) 677 956 IPR011009 -
Mal5g1317 967 PANTHER UNNAMED PRODUCT 88 964 - -
Mal5g1317 967 Gene3D Transferase(Phosphotransferase) domain 1 759 966 - -
Mal5g1317 967 Gene3D Ribonuclease Inhibitor 32 187 IPR032675 -
Mal5g1317 967 Gene3D Ribonuclease Inhibitor 482 607 IPR032675 -
Mal5g1317 967 Pfam Leucine rich repeat N-terminal domain 33 73 IPR013210 -
Mal5g1317 967 Gene3D Phosphorylase Kinase; domain 1 675 758 - -
Mal5g1317 967 PRINTS Leucine-rich repeat signature 344 357 - -
Mal5g1317 967 PRINTS Leucine-rich repeat signature 512 525 - -
Mal5g1317 967 Pfam Leucine rich repeat 318 376 IPR001611 GO:0005515
Mal5g1317 967 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 9 103 - -
Mal5g1317 967 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 88 964 - -
Mal5g1317 967 SUPERFAMILY L domain-like 368 605 - -
Mal5g1317 967 SUPERFAMILY RNI-like 75 400 - -
Mal5g1317 967 SMART LRR_typ_2 464 488 IPR003591 -
Mal5g1317 967 SMART LRR_typ_2 269 292 IPR003591 -
Mal5g1317 967 SMART LRR_typ_2 221 245 IPR003591 -
Mal5g1317 967 SMART LRR_typ_2 317 341 IPR003591 -
Mal5g1317 967 SMART LRR_typ_2 342 364 IPR003591 -
Mal5g1317 967 Pfam Protein kinase domain 683 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1317 967 Pfam Leucine Rich Repeat 271 293 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1317 Mal-Chr5 23027350 23031119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1317 16 961 Receptor kinase-like Gene Family AT5G65700 56.218 0.0 1041
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal5g1317 Pkinase 3.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1317 - - gmx:100816158 1462.2