Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1308 ATGGGTTTTCCGGTGGGTTACGCCGAAGTATTCTTCCCAAACCTCTTCCTCCACACTTTAACCTTCCTCGGCCTACTCCGCAACCTCGTCTTCCTCCTCTTCCACTTCCTCGGCCTCACCGATTTCCTCGAAACCGATACTATCCACGCCGCAGAAACTACATCCACACCGGAACCTTCCAAAAATCCCTCCGTATCAGCACTTCTGATCCGGGAGCTTTTACCGGCGACAAAATACGGTAAACTCACCGACATGGAAGAAGGTTGTTCAAGTGCAGATTGTCTTTTCGAATTCTCCGAGGAAGAGGAGGTCCGATGTTTGAGGAACTGTCAACATATTTTTCATCGAAATTGTGTCGACCGTTGGATTGATCTTGATAAGAAAACTTGTCCACTTTGTAGAACAGGTTTTGTTCCTGAAGATATGGTTGATGATTATAATCAACGTCTTTGGGTTGCTTCTGGTATTAGTGAGTTTTATAGTTATGCAGATTATACTTCTTATTTTTGA 510 0.4431 MGFPVGYAEVFFPNLFLHTLTFLGLLRNLVFLLFHFLGLTDFLETDTIHAAETTSTPEPSKNPSVSALLIRELLPATKYGKLTDMEEGCSSADCLFEFSEEEEVRCLRNCQHIFHRNCVDRWIDLDKKTCPLCRTGFVPEDMVDDYNQRLWVASGISEFYSYADYTSYF* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1308 169 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 161 - -
Mal5g1308 169 SUPERFAMILY RING/U-box 94 140 - -
Mal5g1308 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 141 IPR013083 -
Mal5g1308 169 PANTHER BRH1 RING FINGER PROTEIN 1 161 - -
Mal5g1308 169 Pfam Ring finger domain 94 134 IPR001841 -
Mal5g1308 169 ProSiteProfiles Zinc finger RING-type profile. 94 134 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1308 Mal-Chr5 22757564 22758073 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1308 1 155 C3H Transcription Factor Family AT1G63840 43.396 1.73e-45 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1308 K16281 - gmx:100790975 220.705