Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1307 ATGGGTTTTCTGGTGGGTTACGCCGAAGTATTCTTCCCAAACCTCTTCCTCCACACTTTAACCTTCCTCGGCCTACTCCGCAACCTCGTCTTCCCCCTCTTCCACTTCCTCGGCCTCACCGATTTCCTCGAAACCGATACTATCCACGCCGCAGAAACTTCATCCACACCGGAACCTTCCAAAAACCCCTCCGTATCGGCACTTCTGATCCGGGAGCTTTTACCGGCGACAAAATACGGTAAACTCACCGACATGGAAGAAGGTTGTTCATGTGCAGTTTGTCTTTTCGAATTCTCCGAGGAAGAGGAGGTCCGATGTTTGAGGAACTGTCAACATATTTTTCATCGAAATTGTGTCGACCGTTGGATTGATCTTGATCAGAAAACTTGTCCACTTTGTAGAACAGGTTTTGTTCCTGAAGATATGGTTGATGATTATAATCAACGTCTTTGGGTTGCTTCTGGTATTAGTGAGTTTTATAGTTATGCAGATTATACTTCTTCTTTTTGA 510 0.451 MGFLVGYAEVFFPNLFLHTLTFLGLLRNLVFPLFHFLGLTDFLETDTIHAAETSSTPEPSKNPSVSALLIRELLPATKYGKLTDMEEGCSCAVCLFEFSEEEEVRCLRNCQHIFHRNCVDRWIDLDQKTCPLCRTGFVPEDMVDDYNQRLWVASGISEFYSYADYTSSF* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1307 169 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 161 - -
Mal5g1307 169 Pfam Ring finger domain 90 134 IPR001841 -
Mal5g1307 169 SMART ring_2 91 133 IPR001841 -
Mal5g1307 169 ProSiteProfiles Zinc finger RING-type profile. 91 134 IPR001841 -
Mal5g1307 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 141 IPR013083 -
Mal5g1307 169 PANTHER BRH1 RING FINGER PROTEIN 1 161 - -
Mal5g1307 169 SUPERFAMILY RING/U-box 84 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1307 Mal-Chr5 22753941 22754450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1307 1 155 C3H Transcription Factor Family AT1G63840 44.231 7.20e-47 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1307 K16281 - gmx:100790975 234.572