Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal5g1305 | ATGGGTTTTCCGGTGGGTTACGCCGAACTGTTTTTCCCAAACCTCTTCCTCCACACTTTAACCCTCCTCAGCCTCCTCCGCAACCTCGTCTTCCTCCTCTTCCACTTCCTCGGCCTCTCCGATTTCCTCGAAACCGATACCATCCACGTCGGAGAAACTTCATCTACACCAGAACCTTCCAAAAAACCCTCCACATCAGCGCTTCTCATCCGAGAGCTTTTGCCGGCGACAAAATACGGCGAAGTCACCGACATGGAAAAAGGTTGTTCATGTGCAGTTTGTCTTTTCGAATTCTCCGAGGAAGAAGATATCCGATGTTTGAGGAACTGTCAACATATTTTTCATCGAAATTGTGTCGATCGTTGGATTGATCTTGATCAGAAAACTTGTCCACTTTGTAGAACAAATTTTGTTCCTGAAGATATGGTTGATGATTATAATCAACGTCTTTGGGTTGCTTCTGGTATTAGTGAGTTTTATACTTATTCAGAATATACTTCTTCTTTTTGA | 510 | 0.4353 | MGFPVGYAELFFPNLFLHTLTLLSLLRNLVFLLFHFLGLSDFLETDTIHVGETSSTPEPSKKPSTSALLIRELLPATKYGEVTDMEKGCSCAVCLFEFSEEEDIRCLRNCQHIFHRNCVDRWIDLDQKTCPLCRTNFVPEDMVDDYNQRLWVASGISEFYTYSEYTSSF* | 170 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal5g1305 | 169 | PANTHER | BRH1 RING FINGER PROTEIN | 1 | 164 | - | - | |
Mal5g1305 | 169 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 1 | 164 | - | - | |
Mal5g1305 | 169 | SUPERFAMILY | RING/U-box | 85 | 140 | - | - | |
Mal5g1305 | 169 | Pfam | Ring finger domain | 90 | 134 | IPR001841 | - | |
Mal5g1305 | 169 | ProSiteProfiles | Zinc finger RING-type profile. | 91 | 134 | IPR001841 | - | |
Mal5g1305 | 169 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 70 | 142 | IPR013083 | - | |
Mal5g1305 | 169 | SMART | ring_2 | 91 | 133 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal5g1305 | Mal-Chr5 | 22746205 | 22746714 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal5g1305 | 1 | 155 | C3H Transcription Factor Family | AT1G63840 | 44.654 | 2.95e-48 | 152 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal5g1305 | K16281 | - | gmx:100790975 | 201.445 |