Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1305 ATGGGTTTTCCGGTGGGTTACGCCGAACTGTTTTTCCCAAACCTCTTCCTCCACACTTTAACCCTCCTCAGCCTCCTCCGCAACCTCGTCTTCCTCCTCTTCCACTTCCTCGGCCTCTCCGATTTCCTCGAAACCGATACCATCCACGTCGGAGAAACTTCATCTACACCAGAACCTTCCAAAAAACCCTCCACATCAGCGCTTCTCATCCGAGAGCTTTTGCCGGCGACAAAATACGGCGAAGTCACCGACATGGAAAAAGGTTGTTCATGTGCAGTTTGTCTTTTCGAATTCTCCGAGGAAGAAGATATCCGATGTTTGAGGAACTGTCAACATATTTTTCATCGAAATTGTGTCGATCGTTGGATTGATCTTGATCAGAAAACTTGTCCACTTTGTAGAACAAATTTTGTTCCTGAAGATATGGTTGATGATTATAATCAACGTCTTTGGGTTGCTTCTGGTATTAGTGAGTTTTATACTTATTCAGAATATACTTCTTCTTTTTGA 510 0.4353 MGFPVGYAELFFPNLFLHTLTLLSLLRNLVFLLFHFLGLSDFLETDTIHVGETSSTPEPSKKPSTSALLIRELLPATKYGEVTDMEKGCSCAVCLFEFSEEEDIRCLRNCQHIFHRNCVDRWIDLDQKTCPLCRTNFVPEDMVDDYNQRLWVASGISEFYTYSEYTSSF* 170
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1305 169 PANTHER BRH1 RING FINGER PROTEIN 1 164 - -
Mal5g1305 169 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 164 - -
Mal5g1305 169 SUPERFAMILY RING/U-box 85 140 - -
Mal5g1305 169 Pfam Ring finger domain 90 134 IPR001841 -
Mal5g1305 169 ProSiteProfiles Zinc finger RING-type profile. 91 134 IPR001841 -
Mal5g1305 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 142 IPR013083 -
Mal5g1305 169 SMART ring_2 91 133 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mal5g1305 Mal-Chr5 22746205 22746714 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1305 1 155 C3H Transcription Factor Family AT1G63840 44.654 2.95e-48 152
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1305 K16281 - gmx:100790975 201.445