Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1287 ATGTCAGTGTACGATGCAGCATTCATCGACACACAACTCTCCAAAAAAACATCAATCTTCGGTCTCCGTCTCTGGGTCGTCATCGGAATCCTCGTCGGTTCCTTAATCGTCTTAACTCTCTTCCTTCTCTCTCTCTGTCTCACCTCACACCGCCGCCGCAAAAACCACCACAAACCCACCAAGCTCACCCACTTCACTCCCGTTGTCTCCAAGGAAATCCAAGAAATCATCCACGCACCACCGTTACCAGAGATCCACGTAGACACAGTGAAATTGGAGCTCCACAACCACCGTGTTTCCACCAGTGGAGAGAGTAAGGGTGGTGGTAGTGTGTGTGAGACGGTGTCTTCTTTTGGAAGTGTGGGACCGGAAGTATCGCATCTTGGGTGGGGGAGATGGTATACGCTAAGAGAACTTGAAGCTGCTACTAATGGTTTGTGTGAAGATAATGTTATTGGTGAAGGTGGTTATGGAATTGTTTATAGTGGTGTTCTAACTGATGGTACCAAAATTGCTGTTAAGAATCTCTTGAATAACAAAGGCCAAGCTGAGAGAGAATTTAAAGTTGAGGTAGAAGTAATTGGTCGTGTTCGGCACAAGAATCTTGTTAGGTTGCTCGGATATTGTGTTGAAGGCGCATACAGGATGCTTGTGTATGAATATGTTGATAATGGCAATCTAGACCAGTGGTTGCATGGTGACGTTGGACCTGTTAGCCCTATGACATGGGATATTCGGATGAACATTTTATTGGGCACAGCAAAAGGATTGGCTTATCTTCATGAGGGTCTTGAACCAAAAGTTGTCCACCGAGATGTGAAATCAAGCAACATACTCATTGATCGCCAATGGAACCCTAAGGTTTCTGATTTCGGTCTTGCTAAGCTTCTGCATTCTGAGCACAGTTATGTCACGACTCGAGTGATGGGGACATTTGGTTATGTTGCTCCCGAGTATGCCTGCACTGGAATGCTGACCGAGAGGAGTGACGTGTATAGCTTTGGGATACTCATCATGGAACTAATCACCGGAAGAAGTCCTGTTGATTATAGCAGACCACAAGGAGAGGTTAATTTAGTCGAGTGGTTAAAAAATATGGTTGGGAGTCGAAGAGCTGAGGAAGTAGTTGATCCTAAGCTTTCGGAGAAGCCATCTTCAAAGGCTCTTAAACGTGCTCTATTGGTTGCTCTTCGATGTGTTGATCCCGATTCCTTAAAAAGGCCTAAAATGGGACATGTGATCCACATGCTTGAGGCTGACGACCTCTTATTTCGTGAGGATCGAAGGATCGCCGGAGAATCTTCTCATTCCCATCGTGATTATCAACGAGAGCATAAGGGTTCAAGTTTAGATAAAAATCGGATAGGTGGAGAGATCACTGATCAAAGTGAAGATGATAGTACTAGTAGTAGAAGTCACCATCAGCCTACTAGGTGGAGATGA 1443 0.4511 MSVYDAAFIDTQLSKKTSIFGLRLWVVIGILVGSLIVLTLFLLSLCLTSHRRRKNHHKPTKLTHFTPVVSKEIQEIIHAPPLPEIHVDTVKLELHNHRVSTSGESKGGGSVCETVSSFGSVGPEVSHLGWGRWYTLRELEAATNGLCEDNVIGEGGYGIVYSGVLTDGTKIAVKNLLNNKGQAEREFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLDQWLHGDVGPVSPMTWDIRMNILLGTAKGLAYLHEGLEPKVVHRDVKSSNILIDRQWNPKVSDFGLAKLLHSEHSYVTTRVMGTFGYVAPEYACTGMLTERSDVYSFGILIMELITGRSPVDYSRPQGEVNLVEWLKNMVGSRRAEEVVDPKLSEKPSSKALKRALLVALRCVDPDSLKRPKMGHVIHMLEADDLLFREDRRIAGESSHSHRDYQREHKGSSLDKNRIGGEITDQSEDDSTSSRSHHQPTRWR* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1287 480 Gene3D Transferase(Phosphotransferase) domain 1 222 430 - -
Mal5g1287 480 ProSitePatterns Protein kinases ATP-binding region signature. 152 174 IPR017441 GO:0005524
Mal5g1287 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Mal5g1287 480 SMART serkin_6 146 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1287 480 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1 462 - -
Mal5g1287 480 Gene3D Phosphorylase Kinase; domain 1 128 221 - -
Mal5g1287 480 MobiDBLite consensus disorder prediction 433 473 - -
Mal5g1287 480 CDD STKc_IRAK 152 418 - -
Mal5g1287 480 MobiDBLite consensus disorder prediction 433 480 - -
Mal5g1287 480 ProSiteProfiles Protein kinase domain profile. 146 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1287 480 PANTHER OS01G0323000 PROTEIN 1 462 - -
Mal5g1287 480 Pfam Protein kinase domain 149 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1287 480 SUPERFAMILY Protein kinase-like (PK-like) 122 418 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1287 Mal-Chr5 22530173 22533314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1287 26 418 Trihelix Transcription Factor Family AT5G38560 41.646 1.38e-96 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mal5g1287 Pkinase 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1287 - - gmx:100777348 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g5091 3 131069299 131071757 Mal5g1287 5 22530173 22533314 PCT
Mal3g2757 3 101185557 101189337 Mal5g1287 5 22530173 22533314 PCT