Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1274 ATGGAGGAGAATCCATGGGGGAATTGGTCTTACGATTTGGATATGGAAGAATTTTTATGTCACACCAACAACATATTTGATGAAGAGTTCCTCAGAGATATCCTGGATCAGACACCACAAGATCAATTCAGTGTCCCTATTGCCACAACTGGCCTAGTCAACAACAACTCATCCATCAATGTCTCCCATTCAACTCAACATGGTGCAGAAAATCCAACCAGCTCATTACCAATACCAACAACTTATAAACTGTCTTATGACAATTCTACTACATTGTTACCACCAACTGAACAACATGATTCTTTGCCTTTGTCATCATCAAAGGCTAACCAAGGGTCGAATTCGAAGAAGACTCGAGTCGCTTCTGAGACGCTAGACCACATAATATCAGAGAGGAACAGGAGACAGGAACTTACAAGAAAGTTCATAGAACTTTCAGCATTTCTACCTGGATTGAAGAAGATGGACAAGATTCATATACTAAGAGAAGCTATCAAGTACGTGAAACAACTTGAAGAACGTGTGAAAGAACTAGAAGAAGACATCAAGAAGAAAGGTGCAGGATCAATGATCACCATAACAAGATCTCATCTCCTCATTGACAATGACTCTGCAACGGGTGAAATGAACCCTGAGGAATGCTATGGGGGCAATGAATCACTTCCGGATGTTGAAGCGAGGGTTCTAGGGAAGGAAGTGTTAATCAAGATTCACTGTGGGAAGCAAAAGGGGATTGTGGTCAATATAATGTCCCAGCTTCAACTTCATCATCTCTCCATAACAACTACCAATGTCTTGCCATTTGGAAATACCCTTGACATCACCATTATTGCTCAGGCAAATGGGTGA 849 0.4122 MEENPWGNWSYDLDMEEFLCHTNNIFDEEFLRDILDQTPQDQFSVPIATTGLVNNNSSINVSHSTQHGAENPTSSLPIPTTYKLSYDNSTTLLPPTEQHDSLPLSSSKANQGSNSKKTRVASETLDHIISERNRRQELTRKFIELSAFLPGLKKMDKIHILREAIKYVKQLEERVKELEEDIKKKGAGSMITITRSHLLIDNDSATGEMNPEECYGGNESLPDVEARVLGKEVLIKIHCGKQKGIVVNIMSQLQLHHLSITTTNVLPFGNTLDITIIAQANG* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1274 282 Coils Coil 161 188 - -
Mal5g1274 282 MobiDBLite consensus disorder prediction 58 121 - -
Mal5g1274 282 Gene3D - 110 186 IPR036638 GO:0046983
Mal5g1274 282 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 122 171 IPR011598 GO:0046983
Mal5g1274 282 PANTHER BHLH TRANSCRIPTION FACTOR 15 280 - -
Mal5g1274 282 Pfam Helix-loop-helix DNA-binding domain 127 172 IPR011598 GO:0046983
Mal5g1274 282 SMART finulus 128 177 IPR011598 GO:0046983
Mal5g1274 282 MobiDBLite consensus disorder prediction 58 119 - -
Mal5g1274 282 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 126 188 IPR036638 GO:0046983
Mal5g1274 282 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 15 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1274 Mal-Chr5 22292359 22293964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1274 118 279 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 45.679 4.23e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal5g1274 HLH 4.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1274 - - mtr:MTR_8g069740 398.667