Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal5g1260 | ATGTCTTCCTCAAACTCTTTTTCTCCACCACCTCAAATCCCTTACCTCACCAATCTTGGCTTTGGCTACTCCATAGCCATAGCTCTTGGCTTCCTCTTCCTTCTTTCAACTCTCATTCTTTCATCTTACCTTTGTTGCCGCACTTTCCGCAACAGAAATAACCACCGGAGTAGCAACAATCAGCATAACCCGGACGGCATAGTTTTGCCGCGGGTTATTTTCGTAGCCGAAGACGAAGAAGATCGTGAAGATGTTGTTTTGGGTTTGGACCAGAACGTTATAAATTCGTATCCGAGGTTACAGTATGGTAAAGATTTGGGACACGACAGCACGTGTTCGATCTGTTTGTGTGAGTACAAGGATTCGGAGATGTTGAGGATGATGCCGGAATGTAGACACTACTTTCATCTATGTTGTCTTGATTCGTGGTTGAAACTTAACGGTTCTTGTCCCGTTTGTCGGAACTCACCTATGCCAACGCCGTTATCTACTCCGTTACAAGAAGTTGTTCCACTTTCTCATTACATTGGTGAAAGAAGGACTAGGAGGTAG | 552 | 0.4457 | MSSSNSFSPPPQIPYLTNLGFGYSIAIALGFLFLLSTLILSSYLCCRTFRNRNNHRSSNNQHNPDGIVLPRVIFVAEDEEDREDVVLGLDQNVINSYPRLQYGKDLGHDSTCSICLCEYKDSEMLRMMPECRHYFHLCCLDSWLKLNGSCPVCRNSPMPTPLSTPLQEVVPLSHYIGERRTRR* | 184 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal5g1260 | 183 | ProSiteProfiles | Zinc finger RING-type profile. | 112 | 154 | IPR001841 | - | |
Mal5g1260 | 183 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 75 | 159 | IPR013083 | - | |
Mal5g1260 | 183 | SUPERFAMILY | RING/U-box | 97 | 159 | - | - | |
Mal5g1260 | 183 | Pfam | Ring finger domain | 111 | 154 | IPR001841 | - | |
Mal5g1260 | 183 | PANTHER | RING-H2 FINGER PROTEIN ATL67 | 4 | 181 | IPR044289 | GO:0016567|GO:0016740 | |
Mal5g1260 | 183 | SMART | ring_2 | 112 | 153 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal5g1260 | Mal-Chr5 | 22210914 | 22211465 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal5g1260 | 11 | 176 | C3H Transcription Factor Family | AT5G07040 | 38.824 | 1.53e-37 | 125 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal5g1260 | - | - | vra:106773185 | 278.1 |