Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1242 ATGGATATACAAGAAATTCTCAATATATTTATTCCAGGAAATGTATCCCAAGTCAATGAGGATTCTTCTGAGGGTTTGGGAAATATTACTCACTCGGAGAGCGAAGATTGTTCATCCGAAGAAAATGCAGGTGACACCGACGGAGAAACCGACAATGAAGGGTATGCTTGCAACTTTGATCCTAAAAATGCTATAGAATGTGTTGGTGACATAGAGAGAATTAATTTTAAGGACACAAGTTCGGAAGAAATAATGAGTTACCATTTTCCTAATCGTGAAGTTGCATTCATGTTTTATAATTTGTATGCTTGTTCACATGGATTTGCCGGTAGAAGGAGTCATGTTGTTAGGAACGTTAAAGGTGAAGTTGTGCAACAAACCTTTCTTTGCCATAGAGAGGGTAATAGGAGTGAAAGAATTCGAAATTCTGTTATTCGGAAAAGAGAGCATAAACCGAATAGTCGGTGTGGTTGTTTAGCAAAAATTCAAGTGCATATTGATTTCGATAGCGGACGTTGGTACATCAAATTTTTTGATGATGTTCACAATCATAGTTTTTTGGATGACAAGTATGAGCGGATGCTACCTGCACACAGGAAGATGAGTGATTACGACAAATACCAAATGAAAACAATGAGGAAATCTGGCATTCCAACGTCACGGATTTATGGTTTTTTTGCTACACAGGCTGGTGGTTACGAAAATCTGGGTTATTCAAGGAGAGACATGTACAATGAGCAATTCAAGCACCGAGGAAGCAGTGGTTCTGATGCGGATAGTGCAATTGAATTCCTGAAGGCGATGCGTGCTAGAGATGATTTGATGTACTGGAAGCACACTGTCAATGAGGATGGAACGCTTAGACACTTGTTTTGGTGTGACGGGATTAATCGTATGGACTACACAGTGTTTGGTGATGTTTTGGCCTTTGATGCAACTTATCGGAAAATTCGCTACAATACACCGTTGGTTATTTTTTCTGGCGTAAACCATCACAATAAAAGTGTTATATTTGGTAGTGCAATTGTGGGTGATGAGACAGAAGAAACTTATGTGTGGTTGTTGGAAACTTTTGTTGAAGCTATGGAGGGGAAGCGTCCTGTGTCAGTTATAACTGATGGTGATTTAGCAATGCGAAATGCAATAAGAAGGGTATTTCCAAATGCTCATCATCGTCTGTGTGCTTGGCATCTCATAAGAAATGTAAACAGCAACATAAAAAATCCCAAATTTTTACCGAAGTTCAAACAATGCATGTTTGGTGATTTTGAGGTTGATGAGTTTGAGCGTAGGTGGGCTGCTGTTGTTTGTGAATTTGGTTTGGAAGATAACAACTGGGTTTTGGAGATGTACGAAAAGCGTAAAATGTGGGCTACTGCTCATATTCGTGGACAGTTTTTTGCTGGATTTAGGACAACTTCAAGGTGTGAAGGGTTGCACTCAGAATTTGGAAAATACGTCACTGTTTTATCAAACTTGCTTGATTTTTTACAACAATATTTCCGATGGATGAGTTGTATGAGATTTAAAGAAATAGAAGCTGATTATGCATCATCCTATGGAGAAACTGTTCTGCAAACACAACACAAATTTCTTGAAAAGTCAGCTTCAGAATTGTATACGAGGTCAGTTTTTAGGCTTTTTAGGCCTATGTTGGAGAAGGCATGTCGCTGCAAGGTAGAAGGGTTTGTGAAAGATGGTTCCTGTTTTACTTACAATGTTTACAAATACCCCAGAGAAGATATTCAATGGAAAGTGGTTTTTTGCCAAGATAACTTTAAATTTGAATGTTGTTGCAAGAGATTTGAGACTTTGGGGATTGCTTGTGAACATGTTGTGTCAGTTTTAATTTATCTAAACATTGTGGTGATGCCTGAATGTCTTGTGTTGGATAGATGGACTAAACATGCAAAAGATTCAATAAATGCCACCAATGCAAACAGTTCAAGTCAACGTGATCCAGCCTTTATTACTACTTATGTAACCTGTATTGAGCGCTGTAAGAGAATGGTAAATGCTGCATTTGAGTGTGCGAACCCAGAATACATACGTCAAACAATTGAAATGGTAGAAAAACAAACTGAAGTGTTGGAAGCAAATGGTAGAGGTGAAGATGGTGAATTGTCAATGCTATTTACTCAAACTGGAGGTAGTTTAGGTAATCCACCACGAGTTAGGCGAAAAGGAGGTGTATCTTCGTCAAGGGCAATTGAAAAAACAAAACGAAGCACACCAAAATGTGGAATTTGTGGTAATAAGGGTCACAACCGCAAATCATGTCGCTTCCGTGAAGAATCCAATATACATTCACAGTCTGAAAATGTATACACTCCAAACAATTATGATGACGACTTCATGGAAGAAAATGATGAGTACTTTCTTTATATGTGGTGCCTTTTAGAATTTTACCATTTTCAAACCACTCAATTCTTTTGGATAAAATGCACTATTGTTTTTTCTTATACTTGCCTAAGCGGCCAAAAGTATATTTTATGTATTGCATTTGTCCAAAAGTATATTTCCAAGCGCATTAAATATGAAATGTTAATTAATTTAAATAGTCATAGTGATATTATTTTTTTGGATACGAAAATAAATAGTAATGTTGTTCTTACGAATTTCAAATTTGAAGAGGGAGGCATCCAATGTGAACAATATTTTTTGTCCAGTCTTGTGGAAGTTTTGGTTTGGATGATTTTGTTCCACTCATACTACAATGCTTCTCACCAGGAAACACGCAAACTTTTTGAAAGAAACACGTTATCACATACTCCCTCCTTCCCATAA 2787 0.3732 MDIQEILNIFIPGNVSQVNEDSSEGLGNITHSESEDCSSEENAGDTDGETDNEGYACNFDPKNAIECVGDIERINFKDTSSEEIMSYHFPNREVAFMFYNLYACSHGFAGRRSHVVRNVKGEVVQQTFLCHREGNRSERIRNSVIRKREHKPNSRCGCLAKIQVHIDFDSGRWYIKFFDDVHNHSFLDDKYERMLPAHRKMSDYDKYQMKTMRKSGIPTSRIYGFFATQAGGYENLGYSRRDMYNEQFKHRGSSGSDADSAIEFLKAMRARDDLMYWKHTVNEDGTLRHLFWCDGINRMDYTVFGDVLAFDATYRKIRYNTPLVIFSGVNHHNKSVIFGSAIVGDETEETYVWLLETFVEAMEGKRPVSVITDGDLAMRNAIRRVFPNAHHRLCAWHLIRNVNSNIKNPKFLPKFKQCMFGDFEVDEFERRWAAVVCEFGLEDNNWVLEMYEKRKMWATAHIRGQFFAGFRTTSRCEGLHSEFGKYVTVLSNLLDFLQQYFRWMSCMRFKEIEADYASSYGETVLQTQHKFLEKSASELYTRSVFRLFRPMLEKACRCKVEGFVKDGSCFTYNVYKYPREDIQWKVVFCQDNFKFECCCKRFETLGIACEHVVSVLIYLNIVVMPECLVLDRWTKHAKDSINATNANSSSQRDPAFITTYVTCIERCKRMVNAAFECANPEYIRQTIEMVEKQTEVLEANGRGEDGELSMLFTQTGGSLGNPPRVRRKGGVSSSRAIEKTKRSTPKCGICGNKGHNRKSCRFREESNIHSQSENVYTPNNYDDDFMEENDEYFLYMWCLLEFYHFQTTQFFWIKCTIVFSYTCLSGQKYILCIAFVQKYISKRIKYEMLINLNSHSDIIFLDTKINSNVVLTNFKFEEGGIQCEQYFLSSLVEVLVWMILFHSYYNASHQETRKLFERNTLSHTPSFP* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1242 928 Pfam MULE transposase domain 307 401 IPR018289 -
Mal5g1242 928 PANTHER OS02G0262500 PROTEIN 83 698 - -
Mal5g1242 928 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 83 698 IPR031052 GO:0006355
Mal5g1242 928 ProSiteProfiles Zinc finger SWIM-type profile. 584 620 IPR007527 GO:0008270
Mal5g1242 928 MobiDBLite consensus disorder prediction 20 54 - -
Mal5g1242 928 MobiDBLite consensus disorder prediction 722 744 - -
Mal5g1242 928 Pfam FAR1 DNA-binding domain 98 186 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1242 Mal-Chr5 22035466 22045324 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal5g1242 MULE 2.2e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1242 - - adu:110280242 632.098