Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1237 ATGCTCTTGATTCCAAAATTTTCTAAAGTTTGGGTGAAAAAGAGGATGTGCAAGTGTTATACTATTTCATTGAAGCTAGGAGTGAAGATTGCAGTTGCTTATGGGGGTGCTCCTATTGGACAACAGTTAAGGATTTTGGAACGAGGTGTTGATATTTTGGTTGCGACTCCTGGTCGTTTGGTTGATATGATTGAGAGGGAAAGGGTTTTTTTGAATAAGATTAAATATCTTGCTTTGGATGAGGCTGATCGAATGTTGGACATGGGTTTTGAGAATCAGATTCGCAATATTGTGCAGCAGATGCATATGCCTCCTCCTGGTGATAGACAGACTCTGCTTTTCAGTGCTACCTTTCCGGATAATATACAGGTAGAAGTGGCTTTCCAGCTATTGCGATACATGGTGACAAAGTTCAAATGGTTAGTACTTTGTATCTTTCGTTCTTTTGCTTTATTTCTTCCATATTCTTTAAGTGTATTTAATGTGAGCCATCTGTCTGTTTTTTGTATTAGCTACTGTTGCAGTGGCTTTTATAGTTTATTTAATTATTACCATGTTGCTAATGTGGACCATAATTTGATAAGCTTTCAGGAGTTTAAAAATAACATTTTGGAACCAGGATTAGTAGAACATATTGTTGTCTCCAACACATCAGTTGCCAAAATATATGCGAGGAACTCTCATTGTAATCAAAGAGACAGTGAAGTACTCCAAAGAACTCTTCATGCAAAGGTTTTGTTCTTTAGTGGAACCTAA 756 0.369 MLLIPKFSKVWVKKRMCKCYTISLKLGVKIAVAYGGAPIGQQLRILERGVDILVATPGRLVDMIERERVFLNKIKYLALDEADRMLDMGFENQIRNIVQQMHMPPPGDRQTLLFSATFPDNIQVEVAFQLLRYMVTKFKWLVLCIFRSFALFLPYSLSVFNVSHLSVFCISYCCSGFYSLFNYYHVANVDHNLISFQEFKNNILEPGLVEHIVVSNTSVAKIYARNSHCNQRDSEVLQRTLHAKVLFFSGT* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1237 251 Gene3D - 11 136 IPR027417 -
Mal5g1237 251 SMART ultradead3 1 148 IPR014001 -
Mal5g1237 251 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 37-LIKE ISOFORM X1 26 124 - -
Mal5g1237 251 Pfam DEAD/DEAH box helicase 26 122 IPR011545 GO:0003676|GO:0005524
Mal5g1237 251 Gene3D - 178 248 - -
Mal5g1237 251 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 136 IPR014001 -
Mal5g1237 251 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 124 IPR027417 -
Mal5g1237 251 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 26 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1237 Mal-Chr5 21844700 21846181 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1237 26 137 Eukaryotic Initiation Factors Gene Family AT3G13920 40.179 4.89e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1237 K11594 - gmx:100817549 166.007