Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1217 ATGGGAAACAGTGAGGATGGGAAATCCATTAAGATTGAAAGGCCTTCTTCACCTGTACCAGCTGATCAGGCTAATCAAGCCAACCCGCAGAACACTCATGTCTATCCTGATTGGGCTGCCATGCAGGCATATTATGGGCAAAGAGTCAACATTCCACCATATTTCAACTCAGCTGCTGCTCCTGGTCATGCTCCTCATCCATACATGTGGGGACCACCACCACAGCCTATGATGCATCCATATGGGCCGCCATATGCACCATTTTATTCACATGGAGGGGTTTATACTCATCCAGCTGTTGCCATCGGGCCAAATTCACATGGTCAAGGAATTTCATCTTCACCTGCTGCTGGGACTCCTACAAGCATAGAGACACCAACCAAATCATCTGGAAACACTGATCAGGGTTTAATGAAAAAATTGAAAGGATTTGACGGGCTTGCAATGTCAATAGGCAATGGCAATGCTGAAAGTGCTGAGCGTGGAGCGGAAAACCGGCTATCACGGAGTGTGGATACTGAGGGTTCCAGTGATGGCAACACTACAGGGACCAATGGAACAAGGAAAAGAAGCCGGGACGGAACACCAACAACCACTGATGGAGAAGGGAAAACTGAGATGCAACGTAGTTCAGTTTCCAAAAACACTGCAAACTCCAAAAAGACAGTGCCAGTTACTCCTGCAAGTGTTGCAGAAAAATTTGTTGGACCTGTAATTTCTTCAGGTATGACCACATCACTGGAGCTGAAGAACCCTTCGACTGTTTCCACCGGTGCTCCACAACCTTGTGCAGTTTTGCCTCCTGAAGCTTGGATGCAGAATGAGCGTGAGCTGAAACGTGAGAGGAGGAAACAATCAAACCGTGAATCTGCTAGAAGGTCCAGGCTGAGGAAACAGGCTGAGGCTGAAGAATTGGCACGAAGAGTTGATGCCCTGACTGCTGAGAATTTGGCGCTGAAATCGGAAATGAATGAATTGGCCGAAAATTCGGAGAAGCTGAAGATGGAAAATGCTACATTGAAGGAAAAGCTGAAAAACACTCAACTGGGACAAACAGAAGAGATAATTTTGAACAGCATTGACAAGAAGGCTTCACCTGTAAGTACAGAAAACTTACTATCAAGAGTTAATTCGAATTCTGATGGTAGAACTGCAGAAGAAGATAATGGTTTCTGTGAGAACAAACCAAATTCTGGCGCAAAACTGCATCAACTACTTGATACAAATGCTAGGGCTAATGCTGTGGCAGCTAGTTGA 1257 0.4566 MGNSEDGKSIKIERPSSPVPADQANQANPQNTHVYPDWAAMQAYYGQRVNIPPYFNSAAAPGHAPHPYMWGPPPQPMMHPYGPPYAPFYSHGGVYTHPAVAIGPNSHGQGISSSPAAGTPTSIETPTKSSGNTDQGLMKKLKGFDGLAMSIGNGNAESAERGAENRLSRSVDTEGSSDGNTTGTNGTRKRSRDGTPTTTDGEGKTEMQRSSVSKNTANSKKTVPVTPASVAEKFVGPVISSGMTTSLELKNPSTVSTGAPQPCAVLPPEAWMQNERELKRERRKQSNRESARRSRLRKQAEAEELARRVDALTAENLALKSEMNELAENSEKLKMENATLKEKLKNTQLGQTEEIILNSIDKKASPVSTENLLSRVNSNSDGRTAEEDNGFCENKPNSGAKLHQLLDTNARANAVAAS* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1217 418 MobiDBLite consensus disorder prediction 249 302 - -
Mal5g1217 418 MobiDBLite consensus disorder prediction 375 399 - -
Mal5g1217 418 MobiDBLite consensus disorder prediction 200 225 - -
Mal5g1217 418 Pfam G-box binding protein MFMR 1 100 IPR012900 -
Mal5g1217 418 Coils Coil 288 343 - -
Mal5g1217 418 PANTHER G-BOX-BINDING FACTOR 3 1 418 - -
Mal5g1217 418 MobiDBLite consensus disorder prediction 106 136 - -
Mal5g1217 418 MobiDBLite consensus disorder prediction 1 33 - -
Mal5g1217 418 SUPERFAMILY Leucine zipper domain 278 334 IPR046347 GO:0003700|GO:0006355
Mal5g1217 418 CDD bZIP_plant_GBF1 280 328 IPR045314 GO:0003700|GO:0006355
Mal5g1217 418 SMART brlzneu 275 339 IPR004827 GO:0003700|GO:0006355
Mal5g1217 418 Pfam bZIP transcription factor 275 337 IPR004827 GO:0003700|GO:0006355
Mal5g1217 418 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 282 297 IPR004827 GO:0003700|GO:0006355
Mal5g1217 418 MobiDBLite consensus disorder prediction 19 33 - -
Mal5g1217 418 SUPERFAMILY BLRF2-like 322 375 - -
Mal5g1217 418 MobiDBLite consensus disorder prediction 152 231 - -
Mal5g1217 418 MobiDBLite consensus disorder prediction 169 192 - -
Mal5g1217 418 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 277 340 IPR004827 GO:0003700|GO:0006355
Mal5g1217 418 MobiDBLite consensus disorder prediction 105 138 - -
Mal5g1217 418 Pfam Disordered region downstream of MFMR 134 256 - -
Mal5g1217 418 MobiDBLite consensus disorder prediction 273 302 - -
Mal5g1217 418 Gene3D - 278 330 - -
Mal5g1217 418 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 418 IPR044827 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1217 Mal-Chr5 21551698 21555560 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1217 1 417 bZIP Transcription Factor Family AT2G46270 50.469 5.33e-104 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal5g1217 MFMR_assoc 1.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1217 K09060 - gmx:778133 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1217 5 21551698 21555560 Mal5g1217 5 21551698 21555560 ECH