Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1209 ATGACCCGACCCAACCGAAATCAATCCATAAATAAACAAAACCCTTGCTTCTCAATTCCTAGCTCTTGCATAACTCTTGCGGATCTAGTACCTTCTTCAGCGGCAACAATGGTTTATGTTAAGGCTCAGAAATCCAAGGCTTACTTCAAGCGTTACCAGGTCAAGTTTAAGAGAAGAAGAGAGGGAAAGACCGATTACCGGGCTCGTATTCGCCTGATTAATCAGGATAAGAACAAATACAATACACCCAAGTACCGTTTTGTTGTCCGATTTACCAACAAGGACATAGTGGCACAAATAGTGTCTGCTAGTATTGCTGGTGATATTGTTCTTGCTGCTGCGTATGCACATGAGCTGCCACATTTTGGCCTTGAAGTAGGACTTACAAATTATGCTGCAGCTTATTGCACTGGACTTCTCTTGGCCCGTCGTGTTCTTAAGACACTTGAGATGGATGACGAGTATGAGGGAAATGTTGAGGCTACTGGAGAGGATTATTCAGTGGAGCCAGCTGAGTCCAGGAGGCCATTCCGTGCTCTCCTTGATGTTGGACTTGTTAAGACCACAACTGGAAACCGTGTCTTCGGTGCTTTGAAGGGAGCCCTGGATGGTGGTTTGGACATTCCCCACAGTGACAAGAGGTTTGCTGGTTTTGATAAGGAAAAGAAAGAGCTGGATGCTGAGGTTCACCGCAAGTATATCTTTGGGGGACATGTTGCTGCTTACATGAAGACTTTGATCGAAGATGAGCCAGAGAAATACCAGACTCACTTCAGTGAGTACATCAAGAAAGGAATTGAGGCTGATGGACTTGAGGAGCTGTACAAGAAGGTTCATGCTGCCATTCGTGCAGATCCTTCAATTAAGAAATCAGAGAAGCAGCCTCCCAAACAGCACAAGAGGTATAATCTGAAGAAGCTTACCTACGAAGAGCGGAAAAATAAGTTGATTGCACGTTTGGATGCTCTTAATGCTGCTGTTGACGAGGATGAGGATGATGATTAG 1005 0.4488 MTRPNRNQSINKQNPCFSIPSSCITLADLVPSSAATMVYVKAQKSKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQIVSASIAGDIVLAAAYAHELPHFGLEVGLTNYAAAYCTGLLLARRVLKTLEMDDEYEGNVEATGEDYSVEPAESRRPFRALLDVGLVKTTTGNRVFGALKGALDGGLDIPHSDKRFAGFDKEKKELDAEVHRKYIFGGHVAAYMKTLIEDEPEKYQTHFSEYIKKGIEADGLEELYKKVHAAIRADPSIKKSEKQPPKQHKRYNLKKLTYEERKNKLIARLDALNAAVDEDEDDD* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1209 334 MobiDBLite consensus disorder prediction 286 305 - -
Mal5g1209 334 Coils Coil 306 333 - -
Mal5g1209 334 CDD Ribosomal_L18_L5e 77 206 - -
Mal5g1209 334 PANTHER PROTEIN L5, PUTATIVE-RELATED 37 333 - -
Mal5g1209 334 Pfam Ribosomal L18 C-terminal region 271 324 IPR025607 -
Mal5g1209 334 PANTHER RIBOSOMAL PROTEIN L5-RELATED 37 333 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Mal5g1209 334 Hamap 50S ribosomal protein L18 [rplR]. 50 282 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Mal5g1209 334 Pfam Ribosomal large subunit proteins 60S L5, and 50S L18 50 211 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Mal5g1209 334 SUPERFAMILY Translational machinery components 47 288 - -
Mal5g1209 334 PRINTS Ribosomal protein L5 signature 180 199 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Mal5g1209 334 PRINTS Ribosomal protein L5 signature 242 262 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Mal5g1209 334 PRINTS Ribosomal protein L5 signature 120 140 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Mal5g1209 334 PRINTS Ribosomal protein L5 signature 56 75 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Mal5g1209 334 PRINTS Ribosomal protein L5 signature 200 219 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Mal5g1209 334 PRINTS Ribosomal protein L5 signature 79 98 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Mal5g1209 334 Gene3D - 37 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1209 Mal-Chr5 21477443 21480114 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1209 37 326 Cytoplasmic Ribosomal Protein Gene Family AT5G39740 84.483 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1209 K02932 - gmx:100805868 551.977