Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1200 ATGGACACTCAATCACAACAACATAAAAAAGAATTAGAAGGAGAAGAAAACCGGCTGCTACAATCCGAAGAATGTGAGACAATACCATTGTCCACACTGGCGTCCTCTCTATCAACATCGTTGGACGATGGAAACAAAGAGGACTATGTGTATGCGGCGAAGGACAAGGTTCGTATTTTTGACTTAGAGTCGAATGGCAATACCACTGGATCAACGGTTGTACCGCCGTTTTCATGGAAGAAGCTCTGGCTCTTTACAGGGCCAGGGCTTCTTATGAGCGTGGCGTTTTTGGATCCAGGAAACTTGGAAGGGGACTTGCAAGCCGGCGCGATTGCAGGGTACTCTTTGCTTTGGCTTTTAATGTGGTCCACCATCATGGGGCTCCTCATACAACTTTTATCGGCGAGGCTCGGTGTTGCCACGGGGCGACACTTGGCGGAGCTTTGTAGGGAGGAGTATTCCAATTGGGCAAGGCTAGTTTTGTGGTTCTTAGCTGAGTTGGCTTTGATTGCTGCTGATATTCAAGAGGTTATTGGTAGTGCTATTGCTCTTAAGATTCTTAGCCATGGGATTCTTCCCATTTGGGCTGGTGTTGTAATCACAGCCTTTGATTGTTTCTTCTTTCTATTTTTGGAGAATTATGGAGTTAGGAAGTTGGAAGGTGTTTTTGCTATTTTCATTGGAACTATGGGCTTTTCTTTTGCATGGATGTTCTTTGATACAAAGCCAAGTGAAGAAGAACTTCTTATGGGTCTTTTAATCCCAAAAGTTAGCTCAAAAACCCTACGTCAAGCAGTGGAAATTGTAGGATGTGTGATAACCCCACATAATGTATTTCTCCATTCAGCATTAGTACAATCAAGAGACATTGACATTCGTAACAAAGGCCAAGTTCAAGAGGCTCTAAATTACTACTCAATTGAGTCCTCAATTGCACTTTTAATCACCTTAGTAATAAACCTATTTGTGATAACCGTTTTTGCTAGAGTATTCTATGATACAGAACAAGCCAAAGACATAGGATTAGTAAATGCAGGACAATATCTTGAAGAAAGATATGGTGGTGGATTTTTTCCAATTCTTTATATTTGGGGTATTGGTTTATTAGCAGCTGGTCAAAGTAGCACAATTACTGGTACCTATGCAGGACAATTTATAACTGAGGGATTTTTAAAATTGAATATAAAAAAATGGTTGAGGGCATTGATCACTAGAAGTTGTGCTATTGTTCCAACTATGATTGTAGCGATTGTTTTTAATACTTCAGAAGGTTCATTGGATACTTTGAATGAATGGCTTAATGTGCTTCAAGCAATACAAATTCCTTTTGCACTTATTCCTCTTCTTACTTTGGTGTCTAAAGAAGAGGTCATGGGGACATTCAGAATAGGGCCTATAGTAGAGAGGGTGGCATGGACAGTGGTGGTGCTTGTAATAATGCTTTATGGATATATGTTATTAGATTTCTTCCTCTCTGAAGTGAAGGGATTTTTGTTTGGATTTTTAGTCTTCCTTGGTGCAGCAGCATGGATTTCATTTATTGCATTTCTTCTAAAACATAGTGGTGCTATTTCTTCTATCTTGGTTAGATCACCAAATTCTGAAGGCTTTTCTCTTGCAGGAGCTTAG 1629 0.4002 MDTQSQQHKKELEGEENRLLQSEECETIPLSTLASSLSTSLDDGNKEDYVYAAKDKVRIFDLESNGNTTGSTVVPPFSWKKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAIAGYSLLWLLMWSTIMGLLIQLLSARLGVATGRHLAELCREEYSNWARLVLWFLAELALIAADIQEVIGSAIALKILSHGILPIWAGVVITAFDCFFFLFLENYGVRKLEGVFAIFIGTMGFSFAWMFFDTKPSEEELLMGLLIPKVSSKTLRQAVEIVGCVITPHNVFLHSALVQSRDIDIRNKGQVQEALNYYSIESSIALLITLVINLFVITVFARVFYDTEQAKDIGLVNAGQYLEERYGGGFFPILYIWGIGLLAAGQSSTITGTYAGQFITEGFLKLNIKKWLRALITRSCAIVPTMIVAIVFNTSEGSLDTLNEWLNVLQAIQIPFALIPLLTLVSKEEVMGTFRIGPIVERVAWTVVVLVIMLYGYMLLDFFLSEVKGFLFGFLVFLGAAAWISFIAFLLKHSGAISSILVRSPNSEGFSLAGA* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1200 542 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 80 458 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mal5g1200 542 Pfam Natural resistance-associated macrophage protein 103 464 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mal5g1200 542 MobiDBLite consensus disorder prediction 1 21 - -
Mal5g1200 542 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 39 541 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mal5g1200 542 PRINTS Natural resistance-associated macrophage protein signature 216 237 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mal5g1200 542 PRINTS Natural resistance-associated macrophage protein signature 372 391 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mal5g1200 542 PRINTS Natural resistance-associated macrophage protein signature 265 288 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mal5g1200 542 PRINTS Natural resistance-associated macrophage protein signature 434 453 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mal5g1200 542 PRINTS Natural resistance-associated macrophage protein signature 161 187 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mal5g1200 542 PRINTS Natural resistance-associated macrophage protein signature 400 417 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mal5g1200 542 PRINTS Natural resistance-associated macrophage protein signature 191 210 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mal5g1200 542 Hamap Divalent metal cation transporter MntH [mntH]. 68 490 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mal5g1200 542 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 39 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1200 Mal-Chr5 21399551 21402643 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1200 9 521 Inorganic Solute Cotransporters AT1G47240 70.175 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1200 K21398 - gmx:100801411 911.368