Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1191 ATGACTGCAAATAGTGGAAGAGGAACTGAAGAGCATAAGAGGAAAATCAATGATCCTTTGCCAAGGTCAACTAGATTATGCACACCTATTAGGAAGGACAATGTGATTGGTAATGAGAATAATATTTTGACTAGAAATTTTGCTTCTTTAGCTGGATCTGGACCTCCTAGTACTAGTTTTTGTTCCACTACAGATCCTAAACACATTGTTGAAAAGTTGCATGTTAGGAATTATAAGAACTTGAATGTAGCTTTAGGTATCCCTCCACATAATTCTAAGTATAGTAATAGCTTGAGTAGAGAAATTGCACAAATACCACTTAGATTAAGGAAAGGACAAAAGGGAATTGATTCTAGAAAGAACTTGAATCATGAACAATATAAAGCTTTTGGTAATATAAGTAATATGAATAATACACATTTTGTTAGCAGTAAAATGCAAAGTAGTTCAGCTACATCTAGTTATCCTCAATTATTGGTAGAGAAAACAGTGAAGGGAAAGGGAATTCTTCACAAAGATTTGGAGAATGTGATGTCCGGCACGGAATGTTTTAACGATGGACTCAACTTAAGAGTGTGGCTGAAATCTGAAAGTCGTAAAGTGAAGAAATTAGAAAGGATGTATATGTTTAAACAGATTTTGGAAATGGTTGATTTTGCACACTCTCAAGGATTTGTCTTGGAAGATATAAAACCATCTTGTTTCGTTTTATCGCCTTTGAGTAAAATTAAATACATTGGTTCATATAGCCAACATGTGTTTGATGACCAAAAATCATGTTTCACCTTATTTAAGTCATGCCTAAAGGCTATCATGACTTGCAATGGAACAAGGAAAATGCCTTGGGAACAAGGTACCTGTGCATGCCAAAATTTGAGTGCAAAGAAGCAAAAGCTATGTGAAGAAACAACATCTCTTAAGGAGCAGCATCACTTCAACTGTATTCATGGTTGTGACACAAAAATGGACATGGAGTCAAGGGTTGATAAAGAAAGGTTGTGCCTAGATGGTTCGAGTTATGAACATGCTTTTACAGAAGAAAAGCAGATTATTTCTGAAACCATTCAGTTTGAAGAGAAGTGGTATTCTTGTCCAGAAGTACTCAATGAGGGAACCTGTACATTTTCATCAAATGTTTATAGCCTTGGAGTTCTTCTTTTTGAGTTGCTGTGCAATATTGAGTCATTGGAAGCACATTCAACTGTGATGTTTGATATGCGTCATAGAATCTTACCGCCAAAATTTCTATCACAAAATGCAAAGGAAGCTGGTTTTTGTCTATGGCTTCTGCACCCTGAACCTTCTTCTCGTCCGAATACCAAGATGATTTTAGCATCTGAATTTATACGCGAATTAGAGGCATCAAATTCTGGAGATAATAATGTTATAGTATCTGAAGATGATGTAGCTGACACAGAGGAATTAGAGCATTTTCTAATTTCAGTTGAAGAAGAAAAGAAAAAACAGGAAGCTAAATTGGCCGAAGAGCTACATTGTTTGAACGAAGACATTAAGGAGGTAGAAAGAAATCATTTGCCTGGAACTGATTCAGCATTTCCTTTGTCACAATTGAACTATCTACCGTATCATGATTCTTCCAGTAAAATTATTAGTAGATCTTTTCCAAGTTCATTTGTTGATGAAGCAAGATTTCTGAGTAATATAAGTCAGCTAGAGAATAGTTACTTTTCCATGAGATTCCAAGGCCTGCTCAAGGAGGCTGCAGCTGTTAAGAGCAGTGATAAAAGTGTCACGGAAAGTAGATGGAGATTGCCTCATCTAGAGAATGTTAGTAATGGTCCAAAGAGAATTCAAGGTTCTATTGGTTGTCTAGGACCTTTCTTTGAAGGTATATGCAAATTTGCTCGTTACAGCAAGTTCGAAGAGCGCGGAACATTGAGAAATAGTGATCTGCTTAGTTCTGCTAATGTAATATGTGCCTTAAGTTTTGACCGCGATGAGGACTACATTGCAGCTGGTGGAATTTCAAAGAAAATAAAGATATTTGACCTCAATGCTATTTCAAGTGATTCTGTAGACATTCAGTATCCCGTCGTCGAGATGTCAAACAAATCAAAGCTTAGTTGTGTATGCTGGAACAGTTACATAAAAAACCATCTGGCATCTACTGATTATGATGGTGTGGTTCAGATGTGGGATGCCGGCACCGGTCAGCCACTGTCTCAATACATGGAGCACCAAAAGAGAGCTTGGTCTGTTCACTTTTCGGCGTCCGACCCAAAAATGTTTGCCAGTGGAAGTGATGATTGTTCTGTCAAACTATGGAATATCAGCGAGAGAAATTCTATAGGAACCATAATGAGCCCTGCAAATGTATGTTGTGTTCAGTTCTCTGAATACTCCACAAATCAATTATTTTTCGGATCGGCTGATTACAAGGTGTACGGTTATGATCTTCGTAACACTAAAATCCCTTGGTGTACATTACCTGGGCATGGTAAAGCTGTTAGCTATGTAAAATTTATAGATGCACAAACAGTTGTGTCTGCTTCCACTGATAACTCTTTGAAGCTATGGGACTTGAAGAAAACTAGCTCAGCCGAGTTGTCATCTGATGCTTGTGACTTAACCTTTAGAGGTCATAGTAATGGAAAGAATTTCGTTGGTTTATCTGTTTTGGATGGATACATTGCATGTGGTTCAGAATCTAATGAGGTTTACTGTTATCACAAATCTCTGCCAGTGCCAATGGCTTCTCACAAATTCGAGTCAACCGATCCCATTTCTGGTCATTCAAATAGTAGTGATAACAATGGACAGTTTGTTTCTAGTGTCTGCTGGAGAAAAAAGTCTAACATGCTTGTTGCAGCCAACTCAGTTGGAATTGTGAAACTACTTCAGATGGTGTGA 2871 0.3751 MTANSGRGTEEHKRKINDPLPRSTRLCTPIRKDNVIGNENNILTRNFASLAGSGPPSTSFCSTTDPKHIVEKLHVRNYKNLNVALGIPPHNSKYSNSLSREIAQIPLRLRKGQKGIDSRKNLNHEQYKAFGNISNMNNTHFVSSKMQSSSATSSYPQLLVEKTVKGKGILHKDLENVMSGTECFNDGLNLRVWLKSESRKVKKLERMYMFKQILEMVDFAHSQGFVLEDIKPSCFVLSPLSKIKYIGSYSQHVFDDQKSCFTLFKSCLKAIMTCNGTRKMPWEQGTCACQNLSAKKQKLCEETTSLKEQHHFNCIHGCDTKMDMESRVDKERLCLDGSSYEHAFTEEKQIISETIQFEEKWYSCPEVLNEGTCTFSSNVYSLGVLLFELLCNIESLEAHSTVMFDMRHRILPPKFLSQNAKEAGFCLWLLHPEPSSRPNTKMILASEFIRELEASNSGDNNVIVSEDDVADTEELEHFLISVEEEKKKQEAKLAEELHCLNEDIKEVERNHLPGTDSAFPLSQLNYLPYHDSSSKIISRSFPSSFVDEARFLSNISQLENSYFSMRFQGLLKEAAAVKSSDKSVTESRWRLPHLENVSNGPKRIQGSIGCLGPFFEGICKFARYSKFEERGTLRNSDLLSSANVICALSFDRDEDYIAAGGISKKIKIFDLNAISSDSVDIQYPVVEMSNKSKLSCVCWNSYIKNHLASTDYDGVVQMWDAGTGQPLSQYMEHQKRAWSVHFSASDPKMFASGSDDCSVKLWNISERNSIGTIMSPANVCCVQFSEYSTNQLFFGSADYKVYGYDLRNTKIPWCTLPGHGKAVSYVKFIDAQTVVSASTDNSLKLWDLKKTSSAELSSDACDLTFRGHSNGKNFVGLSVLDGYIACGSESNEVYCYHKSLPVPMASHKFESTDPISGHSNSSDNNGQFVSSVCWRKKSNMLVAANSVGIVKLLQMV* 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1191 956 Coils Coil 483 510 - -
Mal5g1191 956 ProSitePatterns Trp-Asp (WD) repeats signature. 834 848 IPR019775 -
Mal5g1191 956 PANTHER PROTEIN SPA1-RELATED 2 185 956 IPR044630 GO:0009640
Mal5g1191 956 PANTHER LIGASE COP1, PUTATIVE-RELATED 2 185 - -
Mal5g1191 956 SMART serkin_6 127 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1191 956 ProSiteProfiles Trp-Asp (WD) repeats profile. 730 772 IPR001680 GO:0005515
Mal5g1191 956 ProSiteProfiles Protein kinase domain profile. 45 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal5g1191 956 PANTHER LIGASE COP1, PUTATIVE-RELATED 185 956 - -
Mal5g1191 956 PRINTS G protein beta WD-40 repeat signature 707 721 IPR020472 -
Mal5g1191 956 PRINTS G protein beta WD-40 repeat signature 834 848 IPR020472 -
Mal5g1191 956 PRINTS G protein beta WD-40 repeat signature 750 764 IPR020472 -
Mal5g1191 956 SMART WD40_4 723 763 IPR001680 GO:0005515
Mal5g1191 956 SMART WD40_4 681 720 IPR001680 GO:0005515
Mal5g1191 956 SMART WD40_4 908 954 IPR001680 GO:0005515
Mal5g1191 956 SMART WD40_4 858 897 IPR001680 GO:0005515
Mal5g1191 956 SMART WD40_4 635 670 IPR001680 GO:0005515
Mal5g1191 956 SMART WD40_4 809 847 IPR001680 GO:0005515
Mal5g1191 956 SMART WD40_4 766 805 IPR001680 GO:0005515
Mal5g1191 956 Coils Coil 289 309 - -
Mal5g1191 956 MobiDBLite consensus disorder prediction 1 26 - -
Mal5g1191 956 Gene3D - 615 956 IPR015943 GO:0005515
Mal5g1191 956 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 816 849 - -
Mal5g1191 956 PANTHER PROTEIN SPA1-RELATED 2 2 185 IPR044630 GO:0009640
Mal5g1191 956 Gene3D Transferase(Phosphotransferase) domain 1 187 462 - -
Mal5g1191 956 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 730 765 - -
Mal5g1191 956 SUPERFAMILY WD40 repeat-like 643 952 IPR036322 GO:0005515
Mal5g1191 956 SUPERFAMILY Protein kinase-like (PK-like) 182 453 IPR011009 -
Mal5g1191 956 ProSiteProfiles Trp-Asp (WD) repeats profile. 816 856 IPR001680 GO:0005515
Mal5g1191 956 Pfam WD domain, G-beta repeat 815 847 IPR001680 GO:0005515
Mal5g1191 956 Pfam WD domain, G-beta repeat 724 763 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1191 Mal-Chr5 21269339 21273457 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1191 727 911 Miscellaneous Gene Families AT5G08390 25.134 3.56e-08 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_PEK Mal5g1191 WD40 0.0046 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1191 K16240 - gmx:100802144 1249.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1191 5 21269339 21273457 Mal5g1191 5 21269339 21273457 ECH