Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1161 ATGAAATCCATTTTACCTGCAAGTTTGAATGATGATAACAATGAAGAATCAATTCTGTCTTCATACGATTCTTGGCTAGAAAATCACCCTTCAGCATTGGAAAATTTCGAAAAGGTGATGAACATTGCAAGAGAGAAAAAGATTGTTGTGTTCTTAGATTATGATGGAACTCTTTCTCAAATTGTTGATGATCCCGAGAAAGCTTACATGATTGATGCTATGCGTGCAGCTGTGCGGGAAGTTGCTACTTATTTTCCTACTGCCATTGTTAGTGGAAGGAGTAGGAATAAGGTTTATGATTTTGTTAAACTGAAAAATGTTTATTATGCTGGAAGCCATGGAATGGACATATCAACCCCACTAGGGTCTTTCAAGTATCAAGATAAGAAGCATCAAACAAAGGCTCTTGATGAAAAGATAATCAAGGTTTTGAAAGATAATATAAGAATGATAAGTGGCTCGAGCATTGAGGATAATAAGTTTTGTGTCACGGTACACTACCGTTGTGTGAAAAATGAAGAGGATGTTGAAGTTCTCAAAGAAATTGTTGAATCTACTATGAAAGATTACCCTGATTTTCACATATCAGGAGGGGATAAGATTATGGAGATACGCCCAAATATAAAATGGAACAAAGGTGATGCTTTAATGTATTTGCTTGACACTCTTGGATTTGACACCTTTGATGATGTTCTACCCATGCACATTGGAGATGATAGAACAGATGAAGATGCTTTTGAGGTTATAAGACAAATTGGAGGAGGTTTTCCAATTATTGTTTCTTCAATTGCTAAGGAGACATATGCTTCATATTCTCTGCGTGACCCAGCTGATGTTATGGCATTCTTGATTCATTTAGCAAAATGGAAGAAGAACTTGCTACATAAAACTAAACAGCTTTGA 903 0.3588 MKSILPASLNDDNNEESILSSYDSWLENHPSALENFEKVMNIAREKKIVVFLDYDGTLSQIVDDPEKAYMIDAMRAAVREVATYFPTAIVSGRSRNKVYDFVKLKNVYYAGSHGMDISTPLGSFKYQDKKHQTKALDEKIIKVLKDNIRMISGSSIEDNKFCVTVHYRCVKNEEDVEVLKEIVESTMKDYPDFHISGGDKIMEIRPNIKWNKGDALMYLLDTLGFDTFDDVLPMHIGDDRTDEDAFEVIRQIGGGFPIIVSSIAKETYASYSLRDPADVMAFLIHLAKWKKNLLHKTKQL* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1161 300 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 50 251 IPR006379 -
Mal5g1161 300 Pfam Trehalose-phosphatase 51 276 IPR003337 GO:0003824|GO:0005992
Mal5g1161 300 Gene3D - 50 273 IPR023214 -
Mal5g1161 300 SUPERFAMILY HAD-like 49 292 IPR036412 -
Mal5g1161 300 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 139 - -
Mal5g1161 300 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 139 299 - -
Mal5g1161 300 TIGRFAM T6PP: trehalose-phosphatase 46 287 IPR003337 GO:0003824|GO:0005992
Mal5g1161 300 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 139 299 IPR044651 GO:0004805|GO:0005992
Mal5g1161 300 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 139 IPR044651 GO:0004805|GO:0005992
Mal5g1161 300 Gene3D - 130 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1161 Mal-Chr5 20823342 20847797 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1161 37 283 Trehalose Biosynthesis Gene Families AT1G60140 27.481 2.28e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1161 K01087 - cam:101508225 436.032