Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1150 ATGATGAGTCCAAAGGAAAAGAAATTTGTGAGATTTGAAGATTGGAAGTCAGAATCATCATCTTTTAATTTTTCACAATATGATTCTTCAATTGATGGATTTGAAAAAAGAAAATCAAAAACAAGTGTTACTCCTACAGAAAATAATGAATCATTGAAAAAACCAGCTTCTAGGTTTATTGTTCTTGATCCACAAGGTCCACTACTTCAAAAATGGAACAAGGTCTTTGTAATAACATGTGTGATGGCAGTATCTATGGATCCATTGTTCTTTTACATCCCTGTGATTGATGACAAGAGAAAATGCCTTAATTTGGATGGAACATTGAAGATTACTGCTAGTGTTCTTCGCACTTTTTTCGATCTTTTCTACATTCTTCGAATTGTCTTTCAGTTTCGAACGGGGTTTATTGCACCTTCTTCGCGCATTTTTGGAAGGGGCGAGCCGGTTGGTGACCCTTTTGCTATAGCAATGAGATACTTAAGTTCTCACTTCATCATTGACATTCTATCAATTCTACCACTTCCTCAGATGGTGATTTTAGCTATGATTCCAATTCCACAATGCTCAGTTCCATACATAGCGAAGGATTGGTTGAAGTATACAATAATAACACAGTACGCACCGAGACTTCTGCGAATCTATCCATTGTTCAAAGAAGTGACAAGAACTTCTGGTATATTAACTGAGACTGCATGGGCTGGAGCTGCTTATAATCTTTTTCTTTATATGCTAGCAAGTCATGTTGTTGGAGCATTTTGGTATTTGTTTTCGATAGAATCAGAGTTGCGGTGTTGGCGCAGACGATTGAAGAAAACTCCATTCTTTGATGATTCCTATCTGAGCTGTGGACGAGACAATTCGACGCTTTTTTCAATTCTTAACAATTCTACTACTTGTCCTTACAAAAATCCTGATGATATCATTGATCCAGCAGTTTTCAATTTCGGAATATTTATAGATGCTCTAATGTCTCAAGTGGTGGAATTGAATACAAGCTTTCGTCATAAATTCTTCTACTGCTTTTGGTGGGGTTTGCGCAATTTAAGTTCTGTTGGACAGAACTTGAAGACAAGCACTTATATTGGGGAGATAATCTTTGCTATATTCATTGCTGTCTTTGGATTGGTTCTATTTGCATTACTTATAGGAAACATGCAGAAATATCTACAATCTACAACTGTTAGAGTTGAAGAGATGAGAGTCAAAAGGAGAGATGCAGAACAGTGGATGTGCCACCGTATGCTACCGGAGTACTTGAAACAAAGAATTCGACGGTATGAACAATACAAATGGCAAGAAAATCGAGGCGTCGAAGAAGAAACATTAATCCGCAACCTCCCTAAAGATCTCAGAAGAGATATAAAGAGACATCTTTGCTTAGATTTACTTAAAAAAGTGCCAATTTTCGGCAACATGGATAAACAGTTGTTGGATGCAATGTGTGATAAACTGAAGCCCGTCCTTTATACCGAGAAAAGTTACGTTGTTTGTGAAGGTGATCCGGTGGACGAAATGCTCTTCATCATGCGCGGGAAACTTAAAACCGCCACAACAAATGGTGGAAGAACTGGTTTCTTTAACTCGTCCGAACTCAAGGCTGGTGATTTTTGTGGAGAGGAGCTTCTAACATGGGCCTTGGATCCTACAACCCCTTCAAACTTACCTATTTCGACTAGTACGGTGGAAACTATTACAGAAGTTGAAGCTTTTGCTCTCATGCATGATGACTTGAAGATTGTTGCTTCCCAATTTCGACGTCTTATTAATAGAAGACAACTCCAGCACACTTTCAGGTTTTATTCCTTGCAATGGAGGACATGGGGAGCGCGGTTCATACAAGTAATATGGCGTCGATACAGGGAAAAAAGGGCGCAAAAAGTGTTACGCGAAGCGGAAAAAAGACAACAAAATGCTTCTGAAAATGAGGAAGAGTCTTCACCAAGTTTTGCTTCCACTATATATGTACAAAGGTTTGCATCCAATGCATTAAAGCACTTAAGAAGTGGCAAAAAAATGCCACAGACAAAGAGATTGTTACCACTCTTGCCTCGAAAACCAGCTGAGCCGGATTTCATTACTCAAAAAAACTAG 2094 0.3859 MMSPKEKKFVRFEDWKSESSSFNFSQYDSSIDGFEKRKSKTSVTPTENNESLKKPASRFIVLDPQGPLLQKWNKVFVITCVMAVSMDPLFFYIPVIDDKRKCLNLDGTLKITASVLRTFFDLFYILRIVFQFRTGFIAPSSRIFGRGEPVGDPFAIAMRYLSSHFIIDILSILPLPQMVILAMIPIPQCSVPYIAKDWLKYTIITQYAPRLLRIYPLFKEVTRTSGILTETAWAGAAYNLFLYMLASHVVGAFWYLFSIESELRCWRRRLKKTPFFDDSYLSCGRDNSTLFSILNNSTTCPYKNPDDIIDPAVFNFGIFIDALMSQVVELNTSFRHKFFYCFWWGLRNLSSVGQNLKTSTYIGEIIFAIFIAVFGLVLFALLIGNMQKYLQSTTVRVEEMRVKRRDAEQWMCHRMLPEYLKQRIRRYEQYKWQENRGVEEETLIRNLPKDLRRDIKRHLCLDLLKKVPIFGNMDKQLLDAMCDKLKPVLYTEKSYVVCEGDPVDEMLFIMRGKLKTATTNGGRTGFFNSSELKAGDFCGEELLTWALDPTTPSNLPISTSTVETITEVEAFALMHDDLKIVASQFRRLINRRQLQHTFRFYSLQWRTWGARFIQVIWRRYREKRAQKVLREAEKRQQNASENEEESSPSFASTIYVQRFASNALKHLRSGKKMPQTKRLLPLLPRKPAEPDFITQKN* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1150 697 SUPERFAMILY Voltage-gated potassium channels 63 391 - -
Mal5g1150 697 SMART cnmp_10 469 600 IPR000595 -
Mal5g1150 697 CDD CAP_ED 469 601 IPR000595 -
Mal5g1150 697 ProSiteProfiles cAMP/cGMP binding motif profile. 469 573 IPR000595 -
Mal5g1150 697 Gene3D Jelly Rolls 467 587 IPR014710 -
Mal5g1150 697 MobiDBLite consensus disorder prediction 667 697 - -
Mal5g1150 697 Coils Coil 622 645 - -
Mal5g1150 697 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 8 695 - -
Mal5g1150 697 SUPERFAMILY cAMP-binding domain-like 398 587 IPR018490 -
Mal5g1150 697 Gene3D - 75 393 - -
Mal5g1150 697 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 8 695 - -
Mal5g1150 697 Pfam Cyclic nucleotide-binding domain 489 579 IPR000595 -
Mal5g1150 697 Pfam Ion transport protein 72 397 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mal5g1150 697 Gene3D Helix hairpin bin 396 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1150 Mal-Chr5 20543955 20547355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1150 10 692 Ion Channels AT4G01010 61.560 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1150 K05391 - gmx:100795201 1038.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1150 5 20543955 20547355 Mal5g1150 5 20543955 20547355 ECH