Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1033 ATGGACGCTTCGACTTCCGTAGTAAGTGGCTCACAACCCGTATCGCCGTTGAACAATCCCGAAACAGCCGCGATTGAGGGTATGGGAAATGTTTGCTTGTCCGATGAAAACATGAGTGATGCTTCTGAGGACGAGTTAGAATACAATGATAATGTTGAATTTTCTGGATTAGAATTCACTGATGAAACAGCTGTTAATGGTTTGGAGGACATCTGGAAAATCAACTTCACAAATTTAAGAGTGGAAGATGTAATTAAGTACCACTTTTCAGACGTTGGGGTGGCATACTTATTTTATAATTGGTATGCTGGTTTGCATGGTTTTGCTGCAAGGAAGAGCAAGATAATGAGGAACAAAAATGGGGAAAAAACACAACAAATGTTCTTGTGTTATAGACAGGGACACCGAGAAGAAAAAGTTGGAAGCACAAGTCGAAAAAGAGAACCAAAGCCACTCACAAGATGCGGCTGTGATGCAAAATGTAGGGTTCACATTGATGTTAATAGTGGCTGGTGGTACATTAAGTATCTAAATGATGTCCACAACCATACTTTGTTGGATAGTAAGTTCATGGGCATGCTACCGGCACATAGAAAAATGAATGACTACGACAAATTTCAAATGAACAGCATGAGGAAGGTTGGAATTAGGACTTCAAATATTTATGGTTGGTTTGCTTCTCAGGCTGGAGGATTTGAGAAATGGGATAAAATGGTTGCGGAGTTTGGATTGGAAGAGAATACATGGGTTGCAGAAATGTTCGAGAAGCGAAGTATGTGGGCCACAGCCCACATACGAGGTAACTTCTTTGCTGGTTTCAGAACGACGTCTCGATGTGAGGGGCTGCACTCGTTTTTGGGAAAATATGTTAACTATGAAAACAACCTGTTGGAGTTCTTACAACATTTTTTGCGTGCTCTTAGTTATATGAGGTTCAGAGAAGTGCAAGCTGACTTTCAGTCATCACATGGACAAGTTGTGTTGCAAACACAATTGCAAGCTCTTGAGAAGTCTGCGGCAGCTGTATACACCAAGGAGCGGTTTGAATCATTAGGTATTCCTTGTGAACATGTGGTGTGTGTTTTGGTAAATATGGACATTGTGCGAATTCCAGAATGTTTGGTGCTGAAAAGGTGGACAAAGACAGCTAAGGACTCACTTGTTTTCAACGGCAACATGTCTGCAACACAAGATCCATCATTGATTAGTCAATATGTGGGTATGGTGGAGAAGTGTAAGAAGATGGCATTGGCGGCTGTGTCTTGTGGCAGACCACAATATGTGCGTAGTACAATGGATTGGGTGACTTCACGTACACAAATGTTGGAAGCACTGGCAAGGAGTGTGCCAAAATACTATAAGACAAAGTATTAA 1374 0.4148 MDASTSVVSGSQPVSPLNNPETAAIEGMGNVCLSDENMSDASEDELEYNDNVEFSGLEFTDETAVNGLEDIWKINFTNLRVEDVIKYHFSDVGVAYLFYNWYAGLHGFAARKSKIMRNKNGEKTQQMFLCYRQGHREEKVGSTSRKREPKPLTRCGCDAKCRVHIDVNSGWWYIKYLNDVHNHTLLDSKFMGMLPAHRKMNDYDKFQMNSMRKVGIRTSNIYGWFASQAGGFEKWDKMVAEFGLEENTWVAEMFEKRSMWATAHIRGNFFAGFRTTSRCEGLHSFLGKYVNYENNLLEFLQHFLRALSYMRFREVQADFQSSHGQVVLQTQLQALEKSAAAVYTKERFESLGIPCEHVVCVLVNMDIVRIPECLVLKRWTKTAKDSLVFNGNMSATQDPSLISQYVGMVEKCKKMALAAVSCGRPQYVRSTMDWVTSRTQMLEALARSVPKYYKTKY* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1033 457 MobiDBLite consensus disorder prediction 1 19 - -
Mal5g1033 457 MobiDBLite consensus disorder prediction 1 20 - -
Mal5g1033 457 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 85 216 IPR031052 GO:0006355
Mal5g1033 457 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 234 344 IPR031052 GO:0006355
Mal5g1033 457 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 343 404 IPR031052 GO:0006355
Mal5g1033 457 PANTHER OS03G0181600 PROTEIN 85 216 - -
Mal5g1033 457 Pfam FAR1 DNA-binding domain 98 186 IPR004330 -
Mal5g1033 457 PANTHER OS03G0181600 PROTEIN 343 404 - -
Mal5g1033 457 PANTHER OS03G0181600 PROTEIN 234 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1033 Mal-Chr5 18007042 18009267 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal5g1033 FAR1 4.6e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1033 - - mtr:MTR_6g022080 200.29