Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1013 ATGTTCTTAAAGGAAGGTTTATGGGTGGAGTTTTCTAGAGACGACAATGTGTATGACCATCTGGTACAGGTGCATAATAATGACAGAGGTAAAATTGAGAAAGAAAAAAAAAAGATAAGCTATAAACTAGGAAAAATAATTTATAAGCTCGTGAGAAAAAAATGTTACCAAACAAATATTTTTTTTACATTTGATTATGCATGGAACACAATTAATAACGGTACGCGGCGTCCCGATGATATTCTTCAAATCCTCAACAAAGTTTCTTCTGGCACAAGGACATTTTCAGATGTAGCCAAATCACTTCTACCATTCACTCAAAAGAAAGTAGGGATACCAATTAAATCAAACAAGTTGCCTATGACATATAACAAATCAGATGAAGCAAATAATGGTAACTACAATTTCCTATCTCGCGTTTTCAAGTTCAACCGGTCGCGTCCTAAGATAGTTCAGAAAACAACTAATTTTTCCGTTGAGAAGAATGATAAAATTTGTAGAGTGATTTTGGATGATGGTTCTGTTTGTACAAAGACGCCGGTCGAAAAAAGAGTTAGGTGTCATGAACATATAGGAATGAGAATAAGAACATTAGTCATAATCAAAAAGTATAACATCATCATCGTAGTAAATATTTGA 639 0.3333 MFLKEGLWVEFSRDDNVYDHLVQVHNNDRGKIEKEKKKISYKLGKIIYKLVRKKCYQTNIFFTFDYAWNTINNGTRRPDDILQILNKVSSGTRTFSDVAKSLLPFTQKKVGIPIKSNKLPMTYNKSDEANNGNYNFLSRVFKFNRSRPKIVQKTTNFSVEKNDKICRVILDDGSVCTKTPVEKRVRCHEHIGMRIRTLVIIKKYNIIIVVNI* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1013 212 Pfam GIY-YIG domain-containing protein 57 82 - -
Mal5g1013 212 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 61 197 IPR038909 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1013 Mal-Chr5 17753195 17756735 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1013 20 195 HRT Transcription Factor Family AT5G56780 32.828 1.02e-22 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Mal5g1013 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1013 - - lang:109350609 190.66