Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1012 ATGTTGAAGAGAGAGCAATGTGACTACACTAAACATGATTCTAGCTTCTATCGTTGGAAGATTCTTATTGGTCCTTCTGATTGGGAAGATTATTCCAAAGGAAAGGAAGGATGTACAAGATATAGAATCCATAACCTGCCACAAAATTCAGGTCCGGGAGTCTATGAGCTCGGAGTAGCTGTGTCGACTAGCAGTTTGGGGCGTGAAATTTACAAGCTTGCCACCGACTCACGTCGAGTAGTTGTGGTTTATCTAGGAAAAGCTGATAATGTGAGAACAAGACTCCAATGTTATGGTAGAAATGGAGCTCATTTGGGTAATGGTTGTTCTTCATTTGAATCTTCTCACCAAAAGGGATGCTCATTGTTTCATGAGATCTTTCTTCAAGGTTTCCCTATTGTTTATAGATGGGCTCCTATGCAGACCAAGGGAGATGCCTTGCAAACAGAATCTCAACTGCTGAGCACATTTGATTATGCTTGGAACACAATCAATAACGGTACGCGGCGTCCCGATGATATTCTTCAAATGCTCAACAAAATTTCGTCAGGCACGAGAACATTTTCAGATGTAGCCAAATCACTTCTACCCTTCACTCAAAAGAAAGTAGGGATACCAATTATATCAAACAAGTTGCCTGTGAAAGATAACAAATCAGATGAAGCAAATAATCGTAACTACAATTTCCTATCTCGTGTGTTCAAGTTCAACCGGTCGCGTCCTAAGATAGTTCAAGATACAATTGATTTTTCTGTTGAGAAGAATGGTAAAACTTGTGGAGTGATTTTGGATGATGGTTCTGTTTGTACAAAGACGCCAGTCGAAAAAAGAGTTAGGTGTCATGAACATAAAGGAATGAGAATAAGAACATCCAAGTCAGGATCAAAAAGTATAGTAGGAAATGCTTGTAGGCACCAAAATATTAACCATGATGTGGAAAATCCTCCACAAACAGTGGTTGAGAGTCTTGTTGATGAGAGTATCATCACCAAAACTATTATATGTGGAATTATTTTGGAAGATGGATCCACTTGTAGTAAACAACCAGTTAAAGGAAGAAAAAGATGTCATGAACACAAAGGGAGGAGAATTCGAGCATCTGTTCATAAAAATTAG 1116 0.3889 MLKREQCDYTKHDSSFYRWKILIGPSDWEDYSKGKEGCTRYRIHNLPQNSGPGVYELGVAVSTSSLGREIYKLATDSRRVVVVYLGKADNVRTRLQCYGRNGAHLGNGCSSFESSHQKGCSLFHEIFLQGFPIVYRWAPMQTKGDALQTESQLLSTFDYAWNTINNGTRRPDDILQMLNKISSGTRTFSDVAKSLLPFTQKKVGIPIISNKLPVKDNKSDEANNRNYNFLSRVFKFNRSRPKIVQDTIDFSVEKNGKTCGVILDDGSVCTKTPVEKRVRCHEHKGMRIRTSKSGSKSIVGNACRHQNINHDVENPPQTVVESLVDESIITKTIICGIILEDGSTCSKQPVKGRKRCHEHKGRRIRASVHKN* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1012 371 MobiDBLite consensus disorder prediction 349 371 - -
Mal5g1012 371 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 1 368 - -
Mal5g1012 371 MobiDBLite consensus disorder prediction 350 371 - -
Mal5g1012 371 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 1 368 IPR038909 GO:0003677|GO:0006355
Mal5g1012 371 Pfam GIY-YIG domain-containing protein 16 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1012 Mal-Chr5 17733745 17735849 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g1012 1 366 HRT Transcription Factor Family AT5G56780 41.995 9.29e-89 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Mal5g1012 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1012 - - lang:109350609 450.284