LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal5g0991	ATGAGTATCTTCAATTGTTTTCTGAACAAGTTGCAACACATTTGTAGCACTTCACGCCAAAGACTTGCTTGTCTAAGCAAATCCATTTTTTTCTTAGCAGCATGTTTTTGTCGCTTCATCCTCCTAAGAGCAAACCCATTATGGGTTCAAATTGTATATTTCACTTCTCTTTCCATTTTGGGTTTTGGATTTCTCAAAGCTCTAAACCCTTCTTTACATACAACACCTAAAAATATAGATTTGTTCTTCACTTCTGTTTCAGCTACCACAGTTTCAAGCATGTCCACGGTTGAAATACAAATTTTTTCTCACACTCAATTAATCATCATTACCATTTTAATGTTCATAGGTGGTGAAATCTTTACCTCAATGGTAGGACTTCATTTCATTAGATCAAGACTCAAAACTGAGCTAGATAAAATTGCTTCTTCTCATGCACGTCTTGCTCCTCTAAACCCTTTCATTGTTGATCAAATTCATCTTGAAGTTGAAATGGTCACAAACGAGGTACACAATAAATCACATGAATCTCTACACAGTATATCACTTGACTCTTTGCACAATAAATCACATCAATCTTTGCACAATATGTCACATCAATCTTTGAGTACAACAAATGAAAACTTGAGGTATTTGTCTATGAAGTATTTGGGTTATGTAGTTTTTGCTTACTTTGTAATAATCCAAATGATAGGTGTAATTGGGGTGTCTCTTTACCTTGCAATTATTCCTAGTGCTAAACAAGTACTAAAAAACAAGGGTATTAAAATGTTCACATTTTCTCTTTTTACTATAGTTTCAACTTTTGCAAGTTGTGGTTTTGTTCCAACAAATGAAAACATGGTTGTTTTTAGAAAGAATTCGGGTCTTCTTCTTATGCTTATTCCACAAGTACTTCTTGGGAACACATTGTACCCTCCATGCTTGAGATTTTGCATATGGGTATTGGGAAAATTTTACAAGAAGAAAGAGTGTAGATACCTTTTGAAGCATTCAGAAGAGGTTGGTTACAAACACTTGTTACATGGGAAACACACTATTTTTCTTGTGGCTACTGTTTTTGGGTTGATTGTGGTTCAAGTTACATTGTTTTGTGCAATGGATTGGGATTCAGATGGTTTAAAGGGGTTGAGTATTTATCAAAAATTGATTGATGTGTTATTCCAAAGTGTGAATTCAAGACATACGGGAGAAACTATTGTGGACATCTCAATTCTATCACAAGCCATCTTGGTATTGTTTGTGCTCATGATGTACCTTCCTCCTTACACCTCATTTCTCCCATTGGAAGATATTGATGGGAAAAATTCAAAAAACAATGAAAGGATGAAAAAGAGAAGAGGAAAAGTTACGGAAAATTTGATATTCTCTCAACTCTCCTATTTAATCATATTCATTATACTAGTGTGCATTACTGAGAGGAAAAAATTGAAGGAAGATCCTCTCAATTTCAATGTTTTGAACATTGTTGTTGAAGTTATCAGTGCATACGGGAACGTAGGATTTACAACAGGATACAGTTGTGAACGACAATTGCATCCAGAGGCAAATTGTGAAAACAAATGGATTGGATTTGTTGGAAAATGGAGTGATGAGGGTAAGATCATTCTTATACTTGTTATGTTGTTTGGAAGGCTCAAAAAATTCAATATGGATGGAGGCAAGCCATGGAAACTTCTCTGA	1683	0.3464	MSIFNCFLNKLQHICSTSRQRLACLSKSIFFLAACFCRFILLRANPLWVQIVYFTSLSILGFGFLKALNPSLHTTPKNIDLFFTSVSATTVSSMSTVEIQIFSHTQLIIITILMFIGGEIFTSMVGLHFIRSRLKTELDKIASSHARLAPLNPFIVDQIHLEVEMVTNEVHNKSHESLHSISLDSLHNKSHQSLHNMSHQSLSTTNENLRYLSMKYLGYVVFAYFVIIQMIGVIGVSLYLAIIPSAKQVLKNKGIKMFTFSLFTIVSTFASCGFVPTNENMVVFRKNSGLLLMLIPQVLLGNTLYPPCLRFCIWVLGKFYKKKECRYLLKHSEEVGYKHLLHGKHTIFLVATVFGLIVVQVTLFCAMDWDSDGLKGLSIYQKLIDVLFQSVNSRHTGETIVDISILSQAILVLFVLMMYLPPYTSFLPLEDIDGKNSKNNERMKKRRGKVTENLIFSQLSYLIIFIILVCITERKKLKEDPLNFNVLNIVVEVISAYGNVGFTTGYSCERQLHPEANCENKWIGFVGKWSDEGKIILILVMLFGRLKKFNMDGGKPWKLL*	561

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal5g0991	560	Pfam	Cation transport protein	207	516	IPR003445	GO:0006812\|GO:0008324\|GO:0055085
	Mal5g0991	560	PANTHER	SODIUM TRANSPORTER HKT1	24	559	-	-
	Mal5g0991	560	PANTHER	POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED	24	559	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal5g0991	Mal-Chr5	17402442	17411809	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal5g0991	66	559	Inorganic Solute Cotransporters	AT4G10310	46.414	5.74e-145	426

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal5g0991	K24976		-	vvi:100242150	643.269

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