Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0972 ATGGCATCTTCAAATGTTGATTGGAAGTCAAGACTTGTAATGGAATTTGACAATAGGGATGAGGCTTATAAATTTTATCTTGCTTATAGTGTACGTGTGGGCTTTGGAGTTAGACATCGTTGTGCAAACAAGAAGAAAGACGGTAATATATCGTCAGTTAGGATAGTTTGTTGTAAGGAAGGGATGTGGAAGAAAGAGGAAAACGATGCATGTGAAAGAAAAATTCATAGAGTCGAGACTAGAACGAATTGCAAAGCAAGAATTTCACTTTCACTTAAAAATGGAAAGTTGGTCATCCATGAGTTCGTAGAAGAGCATAATCATGATCTACTAACACCAGAGACAACACACATGCTTCGAGACGCTGGATTAAGGCAGAAGGATACATTTCAACTTATGAGTACACATGCAGGGCATAGAGCGAATTTGTTGGAGAATCCATCCTTCTTTCATGCATATCAGATGGATATAGAAGAACAAATTACAAATGTGTTTTGGTGTGATGCAAATATGATTTTGGATTACGGAGGTACAATCATTTTTGGTGCAGCCCTAATGTTTAACGAGACAAGTGAGTCATTTAGATGGTTGTTTGATACATTCTTACAAGCACACAACAACAAAAAACCAAAGACGATCTTCACTGACCAAGATCCAGCAATGGCCAGGGCACTTGCAGATGTGATGCCTGAGACTCGCCATGGTTTATGCACGTGGCACTTGTTGTAG 729 0.3909 MASSNVDWKSRLVMEFDNRDEAYKFYLAYSVRVGFGVRHRCANKKKDGNISSVRIVCCKEGMWKKEENDACERKIHRVETRTNCKARISLSLKNGKLVIHEFVEEHNHDLLTPETTHMLRDAGLRQKDTFQLMSTHAGHRANLLENPSFFHAYQMDIEEQITNVFWCDANMILDYGGTIIFGAALMFNETSESFRWLFDTFLQAHNNKKPKTIFTDQDPAMARALADVMPETRHGLCTWHLL* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0972 242 PANTHER OS03G0181600 PROTEIN 144 175 - -
Mal5g0972 242 PANTHER OS03G0181600 PROTEIN 7 122 - -
Mal5g0972 242 Pfam FAR1 DNA-binding domain 24 111 IPR004330 -
Mal5g0972 242 PANTHER OS03G0181600 PROTEIN 178 241 - -
Mal5g0972 242 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 178 241 IPR031052 GO:0006355
Mal5g0972 242 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 144 175 IPR031052 GO:0006355
Mal5g0972 242 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 7 122 IPR031052 GO:0006355
Mal5g0972 242 Pfam MULE transposase domain 174 241 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0972 Mal-Chr5 17084929 17085906 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal5g0972 FAR1 9.1e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0972 - - cam:101505629 333.569